| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is trpE [H]
Identifier: 148243187
GI number: 148243187
Start: 1804394
End: 1805896
Strand: Direct
Name: trpE [H]
Synonym: SynRCC307_2088
Alternate gene names: 148243187
Gene position: 1804394-1805896 (Clockwise)
Preceding gene: 148243186
Following gene: 148243188
Centisome position: 81.1
GC content: 64.2
Gene sequence:
>1503_bases ATGGCCAGTCCCGATCCGACTACCAACTTCGAGCCGCTGTGGCGGCGTTGGCCGGCGGACCTGGACACGCCGCTGAGCAC CTGGCTCAAGGTGGGCCAGGGCCGCCCCTATGGCGTTTTGCTGGAGTCGGTCGAGGGCGGAGAGCATCTAGGCCGCTGGA GTTTTGTCGCCAGCGACCCTCTTTGGGTGCTGAGTGTGCGCGGCGATCAAGCCTGGCTGGAACACCGCGATGGGCGCCGG GAATCGCTCCAAGGCGACCCCTTTGAACTGCTGCGCCAACGCCTCGCCCCCTACAAAAGCGCCCCAATCCCTGGGCTTCC ACCAGTGGGTCAGTTGTTTGGCTTCTGGGGTTACGAACTCATCCACTGGGTCGAGCCCAGTGTTCCGGTGCATCCCCGCA GCGATGACGACCAGCCCGATGGCTGCTGGATGTTCTGCGACACCTTGCTGGTGTTTGACCAGGTGCGGCGCCAAGTGACG GCTGTCGCTTACGCCGATCACAGCCAAAACGACGATCAAGCAGCCGCCAGAGCGGCGGCTGAACAGCGGCTGGATGCCCT GGAAACCCAATTGCAGCAGCCCCTACCGGCGGGCCTGACGCCACTGGCCTGGAAAGAGCAAGACGCCCAATCGCTCAAGG TGGTCAGCAACACCTCCCAGAGCGCCTTTGAAGACGCTGTCCGCCAAGCTCGCGACCACATCGGCGCCGGTGATGTCTTC CAACTGGTGCTGTCGCAACGCTTGGAGGCGGAGGTCAGCCACGACCCCTTCGATCTGTACCGCAGTCTGCGGATGGTGAA CCCATCGCCCTACATGGGGTTCTTCAGCTTCAACGGCTGGCATCTGATTGGCTCCAGCCCCGAGGTGATGGTGAAAGCCG ACCCCCAAGACGATGGACGGGTGGTGGCCTCCCTGCGGCCGATCGCTGGAACCCGTCGCCGCGGCAGCACAGCCGCCGAA GATCAAGCCCTCGAAGCGGAGCTGCTCGCCGATCCCAAAGAACGGGCCGAGCACGTGATGTTGGTGGATCTCGGCCGCAA TGACCTGGGCCGGGTCTGCCAGCCCGGCAGCGTTGCGGTCAAGGAGCTGATGCTGATTGAGCGCTATTCCCACGTGATGC ACATCGTCTCCCAGGTGGAAGGCGATCTGCAGCCGCAGCACGATGTTTGGGATCTCCTGCGGGCGTCCTTCCCCGCAGGC ACCGTCAGCGGAGCACCCAAGATTCGGGCCATGCAGCTGATCCATGAATTGGAACCCGATGCCCGCGGCCCCTACTCAGG GGTCTATGGCTCGATGGACCTCTGTGGTGCCCTCAACACCGCCATCACCATCCGCACGATGGTGGTGCAACCCGGAGACA ACGGGAGTTGGCGGGTGCAGGTGCAAGCCGGAGCCGGCGTTGTGGCCGACTCTCAGCCGACCGCCGAGCACGAGGAAACC CTCAACAAAGCCCGCGGCATGCTCAAGGCCCTGGCTTGCCTCGAGCCAGGCCAACAGCCATGA
Upstream 100 bases:
>100_bases CGGCCGCAACACCTTCGACAGCTGAATCAACGGCGCTTGGCGCCACATCCTTTAGAAAGGCGGGTCGAACGACCCGCCTT TTTTTCTGCCAAGCCCTGTG
Downstream 100 bases:
>100_bases GCCAAAGCTTGCTCAAGGGCTTTGAAGTGGAGATGTACACCGGCCGCCCCGACGGCACGGTGGTGGGCTGCTCCAGCGAA GCTGCCGCGGCCATCGACGG
Product: anthranilate synthase component I
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 500; Mature: 499
Protein sequence:
>500_residues MASPDPTTNFEPLWRRWPADLDTPLSTWLKVGQGRPYGVLLESVEGGEHLGRWSFVASDPLWVLSVRGDQAWLEHRDGRR ESLQGDPFELLRQRLAPYKSAPIPGLPPVGQLFGFWGYELIHWVEPSVPVHPRSDDDQPDGCWMFCDTLLVFDQVRRQVT AVAYADHSQNDDQAAARAAAEQRLDALETQLQQPLPAGLTPLAWKEQDAQSLKVVSNTSQSAFEDAVRQARDHIGAGDVF QLVLSQRLEAEVSHDPFDLYRSLRMVNPSPYMGFFSFNGWHLIGSSPEVMVKADPQDDGRVVASLRPIAGTRRRGSTAAE DQALEAELLADPKERAEHVMLVDLGRNDLGRVCQPGSVAVKELMLIERYSHVMHIVSQVEGDLQPQHDVWDLLRASFPAG TVSGAPKIRAMQLIHELEPDARGPYSGVYGSMDLCGALNTAITIRTMVVQPGDNGSWRVQVQAGAGVVADSQPTAEHEET LNKARGMLKALACLEPGQQP
Sequences:
>Translated_500_residues MASPDPTTNFEPLWRRWPADLDTPLSTWLKVGQGRPYGVLLESVEGGEHLGRWSFVASDPLWVLSVRGDQAWLEHRDGRR ESLQGDPFELLRQRLAPYKSAPIPGLPPVGQLFGFWGYELIHWVEPSVPVHPRSDDDQPDGCWMFCDTLLVFDQVRRQVT AVAYADHSQNDDQAAARAAAEQRLDALETQLQQPLPAGLTPLAWKEQDAQSLKVVSNTSQSAFEDAVRQARDHIGAGDVF QLVLSQRLEAEVSHDPFDLYRSLRMVNPSPYMGFFSFNGWHLIGSSPEVMVKADPQDDGRVVASLRPIAGTRRRGSTAAE DQALEAELLADPKERAEHVMLVDLGRNDLGRVCQPGSVAVKELMLIERYSHVMHIVSQVEGDLQPQHDVWDLLRASFPAG TVSGAPKIRAMQLIHELEPDARGPYSGVYGSMDLCGALNTAITIRTMVVQPGDNGSWRVQVQAGAGVVADSQPTAEHEET LNKARGMLKALACLEPGQQP >Mature_499_residues ASPDPTTNFEPLWRRWPADLDTPLSTWLKVGQGRPYGVLLESVEGGEHLGRWSFVASDPLWVLSVRGDQAWLEHRDGRRE SLQGDPFELLRQRLAPYKSAPIPGLPPVGQLFGFWGYELIHWVEPSVPVHPRSDDDQPDGCWMFCDTLLVFDQVRRQVTA VAYADHSQNDDQAAARAAAEQRLDALETQLQQPLPAGLTPLAWKEQDAQSLKVVSNTSQSAFEDAVRQARDHIGAGDVFQ LVLSQRLEAEVSHDPFDLYRSLRMVNPSPYMGFFSFNGWHLIGSSPEVMVKADPQDDGRVVASLRPIAGTRRRGSTAAED QALEAELLADPKERAEHVMLVDLGRNDLGRVCQPGSVAVKELMLIERYSHVMHIVSQVEGDLQPQHDVWDLLRASFPAGT VSGAPKIRAMQLIHELEPDARGPYSGVYGSMDLCGALNTAITIRTMVVQPGDNGSWRVQVQAGAGVVADSQPTAEHEETL NKARGMLKALACLEPGQQP
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1787518, Length=392, Percent_Identity=38.7755102040816, Blast_Score=231, Evalue=1e-61, Organism=Escherichia coli, GI1788114, Length=458, Percent_Identity=32.3144104803493, Blast_Score=218, Evalue=6e-58, Organism=Escherichia coli, GI1786809, Length=289, Percent_Identity=28.3737024221453, Blast_Score=77, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6320935, Length=488, Percent_Identity=36.2704918032787, Blast_Score=303, Evalue=5e-83, Organism=Saccharomyces cerevisiae, GI6324361, Length=421, Percent_Identity=24.4655581947743, Blast_Score=114, Evalue=5e-26,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR005256 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 55229; Mature: 55098
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASPDPTTNFEPLWRRWPADLDTPLSTWLKVGQGRPYGVLLESVEGGEHLGRWSFVASDP CCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEECCC LWVLSVRGDQAWLEHRDGRRESLQGDPFELLRQRLAPYKSAPIPGLPPVGQLFGFWGYEL EEEEEECCCHHHHHHCCCCHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH IHWVEPSVPVHPRSDDDQPDGCWMFCDTLLVFDQVRRQVTAVAYADHSQNDDQAAARAAA HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH EQRLDALETQLQQPLPAGLTPLAWKEQDAQSLKVVSNTSQSAFEDAVRQARDHIGAGDVF HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHH QLVLSQRLEAEVSHDPFDLYRSLRMVNPSPYMGFFSFNGWHLIGSSPEVMVKADPQDDGR HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCEEEECCCCCEEEECCCCCCCE VVASLRPIAGTRRRGSTAAEDQALEAELLADPKERAEHVMLVDLGRNDLGRVCQPGSVAV EEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCEEEEEECCCCCHHHCCCCCHHHH KELMLIERYSHVMHIVSQVEGDLQPQHDVWDLLRASFPAGTVSGAPKIRAMQLIHELEPD HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCC ARGPYSGVYGSMDLCGALNTAITIRTMVVQPGDNGSWRVQVQAGAGVVADSQPTAEHEET CCCCCCCCCCCHHHHHHHHHEEEEEEEEEECCCCCCEEEEEEECCCEEECCCCCHHHHHH LNKARGMLKALACLEPGQQP HHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ASPDPTTNFEPLWRRWPADLDTPLSTWLKVGQGRPYGVLLESVEGGEHLGRWSFVASDP CCCCCCCCCCHHHHHCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEECCC LWVLSVRGDQAWLEHRDGRRESLQGDPFELLRQRLAPYKSAPIPGLPPVGQLFGFWGYEL EEEEEECCCHHHHHHCCCCHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH IHWVEPSVPVHPRSDDDQPDGCWMFCDTLLVFDQVRRQVTAVAYADHSQNDDQAAARAAA HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH EQRLDALETQLQQPLPAGLTPLAWKEQDAQSLKVVSNTSQSAFEDAVRQARDHIGAGDVF HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHH QLVLSQRLEAEVSHDPFDLYRSLRMVNPSPYMGFFSFNGWHLIGSSPEVMVKADPQDDGR HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCEEEECCCCCEEEECCCCCCCE VVASLRPIAGTRRRGSTAAEDQALEAELLADPKERAEHVMLVDLGRNDLGRVCQPGSVAV EEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCEEEEEECCCCCHHHCCCCCHHHH KELMLIERYSHVMHIVSQVEGDLQPQHDVWDLLRASFPAGTVSGAPKIRAMQLIHELEPD HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCC ARGPYSGVYGSMDLCGALNTAITIRTMVVQPGDNGSWRVQVQAGAGVVADSQPTAEHEET CCCCCCCCCCCHHHHHHHHHEEEEEEEEEECCCCCCEEEEEEECCCEEECCCCCHHHHHH LNKARGMLKALACLEPGQQP HHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231; 3141423 [H]