| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
Click here to switch to the map view.
The map label for this gene is 148243188
Identifier: 148243188
GI number: 148243188
Start: 1805893
End: 1807026
Strand: Direct
Name: 148243188
Synonym: SynRCC307_2089
Alternate gene names: NA
Gene position: 1805893-1807026 (Clockwise)
Preceding gene: 148243187
Following gene: 148243189
Centisome position: 81.17
GC content: 62.7
Gene sequence:
>1134_bases ATGAGCCAAAGCTTGCTCAAGGGCTTTGAAGTGGAGATGTACACCGGCCGCCCCGACGGCACGGTGGTGGGCTGCTCCAG CGAAGCTGCCGCGGCCATCGACGGGATCGTCACCGAGCCCGACCGCCGCAACCTGGAATACATCACACCGCCTGAAGCCT CCTATGCAGCGCAGCTCCAGCACTTGCTGGAGCCTCGCCAGCGCCTACGCCAGTGGTTGCAACAGCGTCAGCTCACCTTG CTGCCGGGGAGCAGCCTGAGCCTTGGCAACAGCCAACACTTTGAGCGCTCCAATCCCGACAACCCTTATCACCAGTTCAT CGAGGACAGCTACGGCACCCGTGTGGTGACCGCCAGCGTTCACATCAACTTTGGTCTGGAGAGCAGCGAAACGATCATGG CGGCCTGCCGGCTGCTGCGCTGCGAAGCCGCACTGCTGCTGGCCCTCAGTGCCAGCTCCCCGTTCCTTGATGGCCAAGCC ACAGGGGCCCACTCCCAACGCTGGCGGCAATTCCCCATCACCCCACAGCAGGTGCCGCTGTTTGAAAACCATCAGCACTA CATCGATTGGATGCATACCCAGCTGGAACAACAGCAGATGCGCAACGTGCGTCACTTCTGGGGATCGGTGCGTCCCAATG GACCGGAGCGACCGCAGCAGCTCAATCGCGTCGAGCTGCGGGTCTGCGATTTGGTGAGTGATCCGCGCGATCTACTCGCC ATCACTGCGTTTGCGGAATTGCGGCTGCTGCAACTGATCAATCGGGGCCAGAGCGAAGATCCCCTATTCAGCAGTGAGCT GAGCGCAGCAGAGCTGGCTGAGCTGGCCGACCACAACGACCAGCAAGCCGCCCTGACCAGCCTGGATGCTGAGCTGCGCC ACTGGCGCGATGGCCGCTCCATCAGCGCGCGGCAGTGGATCCAAGACCAACTTCAAGACCTCAACGCCTGGGCAGACCAA CAGCCCGCCATGGCCTGGCTTGATCGCCTGCCAGCACTGCTCGAGCGCGGCAACACCGCCATGCAATGGCTGCAGCGCCA GCAGAGCGGTGAGAGCATCTCCGCCATCCTCAGCGCGGATATTGCGGCCCTAGCGGCCCTTGAGCAGGACTTGCTGATGG ACGGTTTGGGATGA
Upstream 100 bases:
>100_bases TTGTGGCCGACTCTCAGCCGACCGCCGAGCACGAGGAAACCCTCAACAAAGCCCGCGGCATGCTCAAGGCCCTGGCTTGC CTCGAGCCAGGCCAACAGCC
Downstream 100 bases:
>100_bases TCGAAACGTCTTCCACTGCTTCGACCTCGCGCATGCCGGCTTCGCAGACCGAGACAGTCCAGCCCGTCGGTCGCCGCACG CTGCGTCAGCTGAACGAACG
Product: glutamate-cysteine ligase family 2 protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MSQSLLKGFEVEMYTGRPDGTVVGCSSEAAAAIDGIVTEPDRRNLEYITPPEASYAAQLQHLLEPRQRLRQWLQQRQLTL LPGSSLSLGNSQHFERSNPDNPYHQFIEDSYGTRVVTASVHINFGLESSETIMAACRLLRCEAALLLALSASSPFLDGQA TGAHSQRWRQFPITPQQVPLFENHQHYIDWMHTQLEQQQMRNVRHFWGSVRPNGPERPQQLNRVELRVCDLVSDPRDLLA ITAFAELRLLQLINRGQSEDPLFSSELSAAELAELADHNDQQAALTSLDAELRHWRDGRSISARQWIQDQLQDLNAWADQ QPAMAWLDRLPALLERGNTAMQWLQRQQSGESISAILSADIAALAALEQDLLMDGLG
Sequences:
>Translated_377_residues MSQSLLKGFEVEMYTGRPDGTVVGCSSEAAAAIDGIVTEPDRRNLEYITPPEASYAAQLQHLLEPRQRLRQWLQQRQLTL LPGSSLSLGNSQHFERSNPDNPYHQFIEDSYGTRVVTASVHINFGLESSETIMAACRLLRCEAALLLALSASSPFLDGQA TGAHSQRWRQFPITPQQVPLFENHQHYIDWMHTQLEQQQMRNVRHFWGSVRPNGPERPQQLNRVELRVCDLVSDPRDLLA ITAFAELRLLQLINRGQSEDPLFSSELSAAELAELADHNDQQAALTSLDAELRHWRDGRSISARQWIQDQLQDLNAWADQ QPAMAWLDRLPALLERGNTAMQWLQRQQSGESISAILSADIAALAALEQDLLMDGLG >Mature_376_residues SQSLLKGFEVEMYTGRPDGTVVGCSSEAAAAIDGIVTEPDRRNLEYITPPEASYAAQLQHLLEPRQRLRQWLQQRQLTLL PGSSLSLGNSQHFERSNPDNPYHQFIEDSYGTRVVTASVHINFGLESSETIMAACRLLRCEAALLLALSASSPFLDGQAT GAHSQRWRQFPITPQQVPLFENHQHYIDWMHTQLEQQQMRNVRHFWGSVRPNGPERPQQLNRVELRVCDLVSDPRDLLAI TAFAELRLLQLINRGQSEDPLFSSELSAAELAELADHNDQQAALTSLDAELRHWRDGRSISARQWIQDQLQDLNAWADQQ PAMAWLDRLPALLERGNTAMQWLQRQQSGESISAILSADIAALAALEQDLLMDGLG
Specific function: ATP-dependent carboxylate-amine ligase [H]
COG id: COG2170
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carboxylate-amine ligase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011793 - InterPro: IPR006336 [H]
Pfam domain/function: PF04107 GCS2 [H]
EC number: NA
Molecular weight: Translated: 42444; Mature: 42313
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSLLKGFEVEMYTGRPDGTVVGCSSEAAAAIDGIVTEPDRRNLEYITPPEASYAAQLQ CCCHHHCCCEEEEEECCCCCCEEECCCCHHHHHHCCCCCCCCCCCCEECCCCHHHHHHHH HLLEPRQRLRQWLQQRQLTLLPGSSLSLGNSQHFERSNPDNPYHQFIEDSYGTRVVTASV HHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEE HINFGLESSETIMAACRLLRCEAALLLALSASSPFLDGQATGAHSQRWRQFPITPQQVPL EEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC FENHQHYIDWMHTQLEQQQMRNVRHFWGSVRPNGPERPQQLNRVELRVCDLVSDPRDLLA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH ITAFAELRLLQLINRGQSEDPLFSSELSAAELAELADHNDQQAALTSLDAELRHWRDGRS HHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC ISARQWIQDQLQDLNAWADQQPAMAWLDRLPALLERGNTAMQWLQRQQSGESISAILSAD CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHH IAALAALEQDLLMDGLG HHHHHHHHHHHHHCCCC >Mature Secondary Structure SQSLLKGFEVEMYTGRPDGTVVGCSSEAAAAIDGIVTEPDRRNLEYITPPEASYAAQLQ CCHHHCCCEEEEEECCCCCCEEECCCCHHHHHHCCCCCCCCCCCCEECCCCHHHHHHHH HLLEPRQRLRQWLQQRQLTLLPGSSLSLGNSQHFERSNPDNPYHQFIEDSYGTRVVTASV HHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEE HINFGLESSETIMAACRLLRCEAALLLALSASSPFLDGQATGAHSQRWRQFPITPQQVPL EEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC FENHQHYIDWMHTQLEQQQMRNVRHFWGSVRPNGPERPQQLNRVELRVCDLVSDPRDLLA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH ITAFAELRLLQLINRGQSEDPLFSSELSAAELAELADHNDQQAALTSLDAELRHWRDGRS HHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC ISARQWIQDQLQDLNAWADQQPAMAWLDRLPALLERGNTAMQWLQRQQSGESISAILSAD CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHH IAALAALEQDLLMDGLG HHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 14621292 [H]