| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148243146
Identifier: 148243146
GI number: 148243146
Start: 1772548
End: 1773744
Strand: Direct
Name: 148243146
Synonym: SynRCC307_2047
Alternate gene names: NA
Gene position: 1772548-1773744 (Clockwise)
Preceding gene: 148243142
Following gene: 148243147
Centisome position: 79.67
GC content: 52.13
Gene sequence:
>1197_bases ATGTCAGAAAGATTTGATATTTTATTTCAAGGGCTTGAAGAAGAATCCGCGCTCAAGCTGATTTTGGCCAACCCTGATGA GTTGGCCAATCCAGTCGATAAATACATGGCAGCAACAAGGCTGGGAGCCAGCCACACGCCTGAATCACTCGATGTACTGA TCCAAGCAATTGACTTAGACCCCGAAAATTTGTTTAACAGAATTACCCGAAGAAAGGCAGCTGAAGCATTGGGGAGACGC AAAGACCCCAAAGCTCTTCCGGGTCTGTTCAAAGCATTGAGCTTTGACGATGAAGCAGCCGTCATCAATGCAGTCGACTC GATCAGCCAAATCAGCGCGGCCCTTGACCAGAAGCAATGCGATCAACTGGTCAGTGCGCTCGCGGGAAGCGACAACATCA AGCGCGCTGTCATCCAATGCCACACCCGTTTAAGACTGAAATCAGGGTTGGAGGCTGTTAAGAGCCTTCAAAACGATGAA AACCCCTTGGTTTCTGGGGCAGCTCGGGCCTATGCAGCTCGAGTTTTTGGCGAATGCGAGTCTTTGAAGCCATTGCTGGC CCAGCTGACAGACCCCATCGCGGGACGACGCAGAGCAGCCGTCATCGACTTGGGAGATGCAGGAGATGCCACAGCGTTGT CAGCTCTCGCCAAAGCACCGGTCTCCATGCCGCTTAGGGCAAAAAGTGCTTTTCAACTGGTGGATCCTGAAAAAAGCGGG TCCATTCCAATGGAATTCACTGAAACGATTAGGTCATTACTAATAGATGACCCCCGGAGCCTCTGGCTACAGGACGACTG GATCTGCGAAGCGAACACCGAAGAGATCGAAAAGAACCTGCAGCACCGCGACGAGGGAAAGCAGTACGGGGGGATCGCCA GCCTGTTGCAGATGGAACGAGGCCAGCAGCTAGAGGCCATCGAGCTCTTCCATCAGAAACTCTGGAGTGACTATGGGGCT AATTACCTACTGACCAGCTTGATTGGCTTGGAAAAATTCGACGAGAAGAGCGAATTAGTCCGCACGGCACTTGCAGAAAC CCTGCCCCAGTACGCCAAGTCGAGAATTGCAGCAGCCTGGGCTTGCCTCAAGCTGGGACTACGCGATCAACTGGGAGTAC TGACTGAGACCATGGAAACGGCTCGCTGGATACCACTAAAATGGAGCTGCGAGCAGGTACTTAAAGAGTTGTCATAA
Upstream 100 bases:
>100_bases TGACAAGTGCCTTGATCAATCCAATGCAACATTAACAGCAAAAGCGGCAGTGCTAGGTTAACGGCGGACTAGACAGTCAA AGCTCCAAAAAACCGTTTCT
Downstream 100 bases:
>100_bases GAGCCCAAAACCACTGGTGCCACAGAGCTTTTCCTCCCAGTAAGGCAAACAATTTCCAAATCTATTCAGATTTTCAGTTT GCAAACTTGTGTGTCTTGAT
Product: bilin biosynthesis protein CpeY
Products: NA
Alternate protein names: ORF Y [H]
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MSERFDILFQGLEEESALKLILANPDELANPVDKYMAATRLGASHTPESLDVLIQAIDLDPENLFNRITRRKAAEALGRR KDPKALPGLFKALSFDDEAAVINAVDSISQISAALDQKQCDQLVSALAGSDNIKRAVIQCHTRLRLKSGLEAVKSLQNDE NPLVSGAARAYAARVFGECESLKPLLAQLTDPIAGRRRAAVIDLGDAGDATALSALAKAPVSMPLRAKSAFQLVDPEKSG SIPMEFTETIRSLLIDDPRSLWLQDDWICEANTEEIEKNLQHRDEGKQYGGIASLLQMERGQQLEAIELFHQKLWSDYGA NYLLTSLIGLEKFDEKSELVRTALAETLPQYAKSRIAAAWACLKLGLRDQLGVLTETMETARWIPLKWSCEQVLKELS
Sequences:
>Translated_398_residues MSERFDILFQGLEEESALKLILANPDELANPVDKYMAATRLGASHTPESLDVLIQAIDLDPENLFNRITRRKAAEALGRR KDPKALPGLFKALSFDDEAAVINAVDSISQISAALDQKQCDQLVSALAGSDNIKRAVIQCHTRLRLKSGLEAVKSLQNDE NPLVSGAARAYAARVFGECESLKPLLAQLTDPIAGRRRAAVIDLGDAGDATALSALAKAPVSMPLRAKSAFQLVDPEKSG SIPMEFTETIRSLLIDDPRSLWLQDDWICEANTEEIEKNLQHRDEGKQYGGIASLLQMERGQQLEAIELFHQKLWSDYGA NYLLTSLIGLEKFDEKSELVRTALAETLPQYAKSRIAAAWACLKLGLRDQLGVLTETMETARWIPLKWSCEQVLKELS >Mature_397_residues SERFDILFQGLEEESALKLILANPDELANPVDKYMAATRLGASHTPESLDVLIQAIDLDPENLFNRITRRKAAEALGRRK DPKALPGLFKALSFDDEAAVINAVDSISQISAALDQKQCDQLVSALAGSDNIKRAVIQCHTRLRLKSGLEAVKSLQNDEN PLVSGAARAYAARVFGECESLKPLLAQLTDPIAGRRRAAVIDLGDAGDATALSALAKAPVSMPLRAKSAFQLVDPEKSGS IPMEFTETIRSLLIDDPRSLWLQDDWICEANTEEIEKNLQHRDEGKQYGGIASLLQMERGQQLEAIELFHQKLWSDYGAN YLLTSLIGLEKFDEKSELVRTALAETLPQYAKSRIAAAWACLKLGLRDQLGVLTETMETARWIPLKWSCEQVLKELS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011989 - InterPro: IPR016024 - InterPro: IPR004155 [H]
Pfam domain/function: PF03130 HEAT_PBS [H]
EC number: NA
Molecular weight: Translated: 43925; Mature: 43793
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERFDILFQGLEEESALKLILANPDELANPVDKYMAATRLGASHTPESLDVLIQAIDLD CCCHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC PENLFNRITRRKAAEALGRRKDPKALPGLFKALSFDDEAAVINAVDSISQISAALDQKQC HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH DQLVSALAGSDNIKRAVIQCHTRLRLKSGLEAVKSLQNDENPLVSGAARAYAARVFGECE HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH SLKPLLAQLTDPIAGRRRAAVIDLGDAGDATALSALAKAPVSMPLRAKSAFQLVDPEKSG HHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCHHCHHHEECCCCCC SIPMEFTETIRSLLIDDPRSLWLQDDWICEANTEEIEKNLQHRDEGKQYGGIASLLQMER CCCHHHHHHHHHHHHCCCHHHCCCCCEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHC GQQLEAIELFHQKLWSDYGANYLLTSLIGLEKFDEKSELVRTALAETLPQYAKSRIAAAW CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH ACLKLGLRDQLGVLTETMETARWIPLKWSCEQVLKELS HHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC >Mature Secondary Structure SERFDILFQGLEEESALKLILANPDELANPVDKYMAATRLGASHTPESLDVLIQAIDLD CCHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC PENLFNRITRRKAAEALGRRKDPKALPGLFKALSFDDEAAVINAVDSISQISAALDQKQC HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH DQLVSALAGSDNIKRAVIQCHTRLRLKSGLEAVKSLQNDENPLVSGAARAYAARVFGECE HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH SLKPLLAQLTDPIAGRRRAAVIDLGDAGDATALSALAKAPVSMPLRAKSAFQLVDPEKSG HHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCHHCHHHEECCCCCC SIPMEFTETIRSLLIDDPRSLWLQDDWICEANTEEIEKNLQHRDEGKQYGGIASLLQMER CCCHHHHHHHHHHHHCCCHHHCCCCCEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHC GQQLEAIELFHQKLWSDYGANYLLTSLIGLEKFDEKSELVRTALAETLPQYAKSRIAAAW CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH ACLKLGLRDQLGVLTETMETARWIPLKWSCEQVLKELS HHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1809846 [H]