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The map label for this gene is cpcG2 [H]

Identifier: 148243135

GI number: 148243135

Start: 1765051

End: 1765824

Strand: Direct

Name: cpcG2 [H]

Synonym: SynRCC307_2036

Alternate gene names: 148243135

Gene position: 1765051-1765824 (Clockwise)

Preceding gene: 148243134

Following gene: 148243136

Centisome position: 79.33

GC content: 59.95

Gene sequence:

>774_bases
ATGGCGATCCCTCTGCTGGATTACCCCCTCACATCGCAGAACGCCAGAGTTTCGAACCTTGCCGGTGACCTGCATGACAA
CGGGCTGGCCACGATTGGTTACGGGGGTGCTGGCCATGACAGCTACAACAGCGAAGTCGATGGAGTGATTCAGCAGGCGT
ACCGCCAAATCTTTTTCCACGCGATGCGCAGTGATCGCGACGTCAACCTCGAATCCCAGCTGCGCAACGGCAACATCACC
GTTCGCGATTTCATTCGCGGCCTGCTGCTCTCGAAACGCTTTCGCGACGACTACTACCAGTGCAGCACCAACTACCGAAT
GGTGGATCAGGTCGTTGGTCGGGCCCTCGGCCGCCCGGTGCATGGCGATGCGGAACGGCGCGCCTGGTCGATCGTGATTG
GGGAGAAGGGCTTCAACGCCTTTGTTGATCAGCTTCTCGACAGCGACGAATACATGGCCAGCTTTGGCTATGACAGCGTT
CCCGAGCAGCGCTCGCGCAAGCTGCCGGGCCAAGCCACCGGCGAAATCCCCATTTATCAGCGCTTTCCCCGCTATGGCGC
CGACTGGCGCGACAGCCTGCAAGAGCGTGCACCCAGCCCCAACTTCCAAGTCAGTGGCGGGACCCAGATGCAGATGTCAG
CGGTTTGGGCAGGTGGTCAGCCACCGGCTTGGGCCCTCAAACTCTGGCTGGGACTCTTTGCTACCGGCGGCTTTGAGCTG
GTGCGCTTTGTCCTAACCATTGCCGCTGAAATGCTAAAAACGGCGCAAGGTTGA

Upstream 100 bases:

>100_bases
TCGCAAATCAATGCCTGTGTCGTTACGAGCTGCTAAGTCAGCCCGAAAGGCCTGCTCACCAACAGCACAATGAGCGTCCT
TTCCATTTCCCCGCGGCCCA

Downstream 100 bases:

>100_bases
GGCGTTCGTTCTGCAGCGGTTAGAGCTCAACAATTGGGCCCCTCCTGAACAGGCTCGTCCAGAGGGATCCTCCATCAGCT
CCATTGATGCGCGTGGTGCG

Product: phycobilisome rod-core linker polypeptide CpcG (L-RC 28.5)

Products: NA

Alternate protein names: L-RC 28.5 [H]

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MAIPLLDYPLTSQNARVSNLAGDLHDNGLATIGYGGAGHDSYNSEVDGVIQQAYRQIFFHAMRSDRDVNLESQLRNGNIT
VRDFIRGLLLSKRFRDDYYQCSTNYRMVDQVVGRALGRPVHGDAERRAWSIVIGEKGFNAFVDQLLDSDEYMASFGYDSV
PEQRSRKLPGQATGEIPIYQRFPRYGADWRDSLQERAPSPNFQVSGGTQMQMSAVWAGGQPPAWALKLWLGLFATGGFEL
VRFVLTIAAEMLKTAQG

Sequences:

>Translated_257_residues
MAIPLLDYPLTSQNARVSNLAGDLHDNGLATIGYGGAGHDSYNSEVDGVIQQAYRQIFFHAMRSDRDVNLESQLRNGNIT
VRDFIRGLLLSKRFRDDYYQCSTNYRMVDQVVGRALGRPVHGDAERRAWSIVIGEKGFNAFVDQLLDSDEYMASFGYDSV
PEQRSRKLPGQATGEIPIYQRFPRYGADWRDSLQERAPSPNFQVSGGTQMQMSAVWAGGQPPAWALKLWLGLFATGGFEL
VRFVLTIAAEMLKTAQG
>Mature_256_residues
AIPLLDYPLTSQNARVSNLAGDLHDNGLATIGYGGAGHDSYNSEVDGVIQQAYRQIFFHAMRSDRDVNLESQLRNGNITV
RDFIRGLLLSKRFRDDYYQCSTNYRMVDQVVGRALGRPVHGDAERRAWSIVIGEKGFNAFVDQLLDSDEYMASFGYDSVP
EQRSRKLPGQATGEIPIYQRFPRYGADWRDSLQERAPSPNFQVSGGTQMQMSAVWAGGQPPAWALKLWLGLFATGGFELV
RFVLTIAAEMLKTAQG

Specific function: Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PBS-linker domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001297
- InterPro:   IPR016470
- ProDom:   PD000852 [H]

Pfam domain/function: PF00427 PBS_linker_poly [H]

EC number: NA

Molecular weight: Translated: 28694; Mature: 28562

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIPLLDYPLTSQNARVSNLAGDLHDNGLATIGYGGAGHDSYNSEVDGVIQQAYRQIFFH
CCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
AMRSDRDVNLESQLRNGNITVRDFIRGLLLSKRFRDDYYQCSTNYRMVDQVVGRALGRPV
HHHCCCCCCHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
HGDAERRAWSIVIGEKGFNAFVDQLLDSDEYMASFGYDSVPEQRSRKLPGQATGEIPIYQ
CCCCHHCEEEEEECCCCHHHHHHHHHCCHHHHHHCCCCCCCHHHHHCCCCCCCCCCCHHH
RFPRYGADWRDSLQERAPSPNFQVSGGTQMQMSAVWAGGQPPAWALKLWLGLFATGGFEL
HCCCCCCCHHHHHHHHCCCCCEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCHHHH
VRFVLTIAAEMLKTAQG
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AIPLLDYPLTSQNARVSNLAGDLHDNGLATIGYGGAGHDSYNSEVDGVIQQAYRQIFFH
CCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
AMRSDRDVNLESQLRNGNITVRDFIRGLLLSKRFRDDYYQCSTNYRMVDQVVGRALGRPV
HHHCCCCCCHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
HGDAERRAWSIVIGEKGFNAFVDQLLDSDEYMASFGYDSVPEQRSRKLPGQATGEIPIYQ
CCCCHHCEEEEEECCCCHHHHHHHHHCCHHHHHHCCCCCCCHHHHHCCCCCCCCCCCHHH
RFPRYGADWRDSLQERAPSPNFQVSGGTQMQMSAVWAGGQPPAWALKLWLGLFATGGFEL
HCCCCCCCHHHHHHHHCCCCCEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCHHHH
VRFVLTIAAEMLKTAQG
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2164365 [H]