| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242909
Identifier: 148242909
GI number: 148242909
Start: 1574071
End: 1574370
Strand: Direct
Name: 148242909
Synonym: SynRCC307_1810
Alternate gene names: NA
Gene position: 1574071-1574370 (Clockwise)
Preceding gene: 148242908
Following gene: 148242910
Centisome position: 70.75
GC content: 64.0
Gene sequence:
>300_bases TTGTTCCAGCCCACCAGCTCAGATCACAGCGCCTTCTGGTTCGAGGACACCAGTCCGAGCCAGTGGGATGGCGATGTCGG CCGGGCTTGTGAAGCCGCTGTGGCCGATTGGCAGCGCTTCCAACGGGAAGCCGAGTCGATCCTCGAGCCGGTCATTCCCA ACCTGCGCGTGCGCCATCACCTGACGATGGATCTGGCCAACCACGCCTTCCCTGAAGCCTTCAGCCCAGCCTGCCAGCTC TGGCGCCAAGAGGAGGAGGCCCTCAGCCTGGAAACGCTGCATCAACCGCTCGACGCCTGA
Upstream 100 bases:
>100_bases CGGCTACGGCGTCCGCACCCTGGTGGAGTGGTGCCAGGCAGTTGCTGCTGATGCGAAGGAAGGGTTAAGCCAGGGGTGAT CCACTCCCGGTGTTTATAAG
Downstream 100 bases:
>100_bases GGAGAGCCGAACCAAAGCGTCCGGTTCTCCCCATCGCCCCAAACGGCTGAGCGTTTCACCGTGAAGGGAGAGCCGCAAGG AGCGCGGTGATGGTGAAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 99
Protein sequence:
>99_residues MFQPTSSDHSAFWFEDTSPSQWDGDVGRACEAAVADWQRFQREAESILEPVIPNLRVRHHLTMDLANHAFPEAFSPACQL WRQEEEALSLETLHQPLDA
Sequences:
>Translated_99_residues MFQPTSSDHSAFWFEDTSPSQWDGDVGRACEAAVADWQRFQREAESILEPVIPNLRVRHHLTMDLANHAFPEAFSPACQL WRQEEEALSLETLHQPLDA >Mature_99_residues MFQPTSSDHSAFWFEDTSPSQWDGDVGRACEAAVADWQRFQREAESILEPVIPNLRVRHHLTMDLANHAFPEAFSPACQL WRQEEEALSLETLHQPLDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11349; Mature: 11349
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQPTSSDHSAFWFEDTSPSQWDGDVGRACEAAVADWQRFQREAESILEPVIPNLRVRHH CCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LTMDLANHAFPEAFSPACQLWRQEEEALSLETLHQPLDA HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MFQPTSSDHSAFWFEDTSPSQWDGDVGRACEAAVADWQRFQREAESILEPVIPNLRVRHH CCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LTMDLANHAFPEAFSPACQLWRQEEEALSLETLHQPLDA HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA