| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242888
Identifier: 148242888
GI number: 148242888
Start: 1554467
End: 1554796
Strand: Direct
Name: 148242888
Synonym: SynRCC307_1789
Alternate gene names: NA
Gene position: 1554467-1554796 (Clockwise)
Preceding gene: 148242887
Following gene: 148242889
Centisome position: 69.87
GC content: 62.73
Gene sequence:
>330_bases ATGGAGAGCAGCAACCCACTGCAGCAGCTGCTGGTGCGCGGCATTGGCACCACCAATGTGGTGGCCGATCGGCTCAAGTC GGTGATCCAGGGCTGGGTCACCAGCGGCCGCATTGATGCCAGCCAGGCCTCCAGCCTGATTGAAGAGGTCAGCGGCGCGA TGCGGGGTGACAACCCCGCTGCTGAGAAGCAGGCCGAGCAACAGATCGAGCGCAACCTCGATCAACTGCTGCATGAAATG GGCCTGGCGCGTCAGCGCGAGGTGGATGAACTGCGGGGCCGCATTGATCGCCTTGAGCAACAGCTGCGTCAAAACGGCGA ACTTCGCTGA
Upstream 100 bases:
>100_bases TGCGTGATCAAGGCTGGCTCGAGGTCGAACACAGCCGCCATGTGGTCGTCAAATCCGCTCAAAAGCGCTAAACCGCAGGC AGTTCAAGCGGCCCCAGCCG
Downstream 100 bases:
>100_bases CAGAATCAATCGGTCTTTCTCAGCCCTTGATGCGCGACATCCTGATCAGCTCCGCCGTTTGCGTGGGCTGCCTGATGCTG GCTCTGGTTAGCCAGATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MESSNPLQQLLVRGIGTTNVVADRLKSVIQGWVTSGRIDASQASSLIEEVSGAMRGDNPAAEKQAEQQIERNLDQLLHEM GLARQREVDELRGRIDRLEQQLRQNGELR
Sequences:
>Translated_109_residues MESSNPLQQLLVRGIGTTNVVADRLKSVIQGWVTSGRIDASQASSLIEEVSGAMRGDNPAAEKQAEQQIERNLDQLLHEM GLARQREVDELRGRIDRLEQQLRQNGELR >Mature_109_residues MESSNPLQQLLVRGIGTTNVVADRLKSVIQGWVTSGRIDASQASSLIEEVSGAMRGDNPAAEKQAEQQIERNLDQLLHEM GLARQREVDELRGRIDRLEQQLRQNGELR
Specific function: Unknown
COG id: COG3937
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12205; Mature: 12205
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESSNPLQQLLVRGIGTTNVVADRLKSVIQGWVTSGRIDASQASSLIEEVSGAMRGDNPA CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHH AEKQAEQQIERNLDQLLHEMGLARQREVDELRGRIDRLEQQLRQNGELR HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MESSNPLQQLLVRGIGTTNVVADRLKSVIQGWVTSGRIDASQASSLIEEVSGAMRGDNPA CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHH AEKQAEQQIERNLDQLLHEMGLARQREVDELRGRIDRLEQQLRQNGELR HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA