Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242888

Identifier: 148242888

GI number: 148242888

Start: 1554467

End: 1554796

Strand: Direct

Name: 148242888

Synonym: SynRCC307_1789

Alternate gene names: NA

Gene position: 1554467-1554796 (Clockwise)

Preceding gene: 148242887

Following gene: 148242889

Centisome position: 69.87

GC content: 62.73

Gene sequence:

>330_bases
ATGGAGAGCAGCAACCCACTGCAGCAGCTGCTGGTGCGCGGCATTGGCACCACCAATGTGGTGGCCGATCGGCTCAAGTC
GGTGATCCAGGGCTGGGTCACCAGCGGCCGCATTGATGCCAGCCAGGCCTCCAGCCTGATTGAAGAGGTCAGCGGCGCGA
TGCGGGGTGACAACCCCGCTGCTGAGAAGCAGGCCGAGCAACAGATCGAGCGCAACCTCGATCAACTGCTGCATGAAATG
GGCCTGGCGCGTCAGCGCGAGGTGGATGAACTGCGGGGCCGCATTGATCGCCTTGAGCAACAGCTGCGTCAAAACGGCGA
ACTTCGCTGA

Upstream 100 bases:

>100_bases
TGCGTGATCAAGGCTGGCTCGAGGTCGAACACAGCCGCCATGTGGTCGTCAAATCCGCTCAAAAGCGCTAAACCGCAGGC
AGTTCAAGCGGCCCCAGCCG

Downstream 100 bases:

>100_bases
CAGAATCAATCGGTCTTTCTCAGCCCTTGATGCGCGACATCCTGATCAGCTCCGCCGTTTGCGTGGGCTGCCTGATGCTG
GCTCTGGTTAGCCAGATCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MESSNPLQQLLVRGIGTTNVVADRLKSVIQGWVTSGRIDASQASSLIEEVSGAMRGDNPAAEKQAEQQIERNLDQLLHEM
GLARQREVDELRGRIDRLEQQLRQNGELR

Sequences:

>Translated_109_residues
MESSNPLQQLLVRGIGTTNVVADRLKSVIQGWVTSGRIDASQASSLIEEVSGAMRGDNPAAEKQAEQQIERNLDQLLHEM
GLARQREVDELRGRIDRLEQQLRQNGELR
>Mature_109_residues
MESSNPLQQLLVRGIGTTNVVADRLKSVIQGWVTSGRIDASQASSLIEEVSGAMRGDNPAAEKQAEQQIERNLDQLLHEM
GLARQREVDELRGRIDRLEQQLRQNGELR

Specific function: Unknown

COG id: COG3937

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12205; Mature: 12205

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESSNPLQQLLVRGIGTTNVVADRLKSVIQGWVTSGRIDASQASSLIEEVSGAMRGDNPA
CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHH
AEKQAEQQIERNLDQLLHEMGLARQREVDELRGRIDRLEQQLRQNGELR
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MESSNPLQQLLVRGIGTTNVVADRLKSVIQGWVTSGRIDASQASSLIEEVSGAMRGDNPA
CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHH
AEKQAEQQIERNLDQLLHEMGLARQREVDELRGRIDRLEQQLRQNGELR
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA