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The map label for this gene is ptrA [H]

Identifier: 148242887

GI number: 148242887

Start: 1553796

End: 1554437

Strand: Direct

Name: ptrA [H]

Synonym: SynRCC307_1788

Alternate gene names: 148242887

Gene position: 1553796-1554437 (Clockwise)

Preceding gene: 148242883

Following gene: 148242888

Centisome position: 69.84

GC content: 61.68

Gene sequence:

>642_bases
ATGGTCGCCACCCCACAGCCTCAACGCGACGCCAATCCCGACAAGTTAGAGCTGCGTCAATTACTCGAAAACAGCTTTCA
CAATCACGATCTGGTCACCATGGCTCCTGGAAGCCCGGTGCCTCTGCTCAAGGGACACATCTGGCTGGTGGTGCGCGGCA
TGACCAAGCTCGTGACCTCTTCGATGAATGGCGATGAGGCCCTGCTGGGCCTGGTGGGCCCCGGCGAGCCCTTTGGTGAA
CCCCTCAGCCAGGTGGATCCCTATGAGGCCATCACCTTGAGCCAGTGCGATCTGCTGTGTTTGCGCTGGAGTGAATTCAC
CAGCAACCCCAGCCTGAGCAGGGGCATGCTCTTGGCCACCGCCAAGCGCTACCGCCAGGTGGAAGCGCTGCTGGCCTTGG
TGGGGCAACGGCGCGTGGAAGAGCGCCTGCGCAGCTTCTTTGAATTGATGGCCAGGGAATACGGCCAGCCCTGCGAGCAG
GGGGTGCGCATCAGCGTGCGGCTCACCCACCAAGATCTCGCCAACCTGCTGGGCACCACGCGGGTCACCGTGACCCGCTT
CATTGGTCAACTGCGTGATCAAGGCTGGCTCGAGGTCGAACACAGCCGCCATGTGGTCGTCAAATCCGCTCAAAAGCGCT
AA

Upstream 100 bases:

>100_bases
GCAGTTGTTAGCCAACTCTTAAGCGGACGACCTCCGTGCCTTAGCCCAAGGGGCAGGTCATGCCTCATACATTTCCGCGT
GTCGTGCAGAACATGGAGTC

Downstream 100 bases:

>100_bases
ACCGCAGGCAGTTCAAGCGGCCCCAGCCGATGGAGAGCAGCAACCCACTGCAGCAGCTGCTGGTGCGCGGCATTGGCACC
ACCAATGTGGTGGCCGATCG

Product: Crp family transcriptional regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MVATPQPQRDANPDKLELRQLLENSFHNHDLVTMAPGSPVPLLKGHIWLVVRGMTKLVTSSMNGDEALLGLVGPGEPFGE
PLSQVDPYEAITLSQCDLLCLRWSEFTSNPSLSRGMLLATAKRYRQVEALLALVGQRRVEERLRSFFELMAREYGQPCEQ
GVRISVRLTHQDLANLLGTTRVTVTRFIGQLRDQGWLEVEHSRHVVVKSAQKR

Sequences:

>Translated_213_residues
MVATPQPQRDANPDKLELRQLLENSFHNHDLVTMAPGSPVPLLKGHIWLVVRGMTKLVTSSMNGDEALLGLVGPGEPFGE
PLSQVDPYEAITLSQCDLLCLRWSEFTSNPSLSRGMLLATAKRYRQVEALLALVGQRRVEERLRSFFELMAREYGQPCEQ
GVRISVRLTHQDLANLLGTTRVTVTRFIGQLRDQGWLEVEHSRHVVVKSAQKR
>Mature_213_residues
MVATPQPQRDANPDKLELRQLLENSFHNHDLVTMAPGSPVPLLKGHIWLVVRGMTKLVTSSMNGDEALLGLVGPGEPFGE
PLSQVDPYEAITLSQCDLLCLRWSEFTSNPSLSRGMLLATAKRYRQVEALLALVGQRRVEERLRSFFELMAREYGQPCEQ
GVRISVRLTHQDLANLLGTTRVTVTRFIGQLRDQGWLEVEHSRHVVVKSAQKR

Specific function: Probably regulates the expression of genes from the sulfate permease complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH crp-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018490
- InterPro:   IPR001808
- InterPro:   IPR012318
- InterPro:   IPR014710
- InterPro:   IPR018335
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00325 Crp [H]

EC number: NA

Molecular weight: Translated: 23964; Mature: 23964

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS50042 CNMP_BINDING_3 ; PS00042 HTH_CRP_1 ; PS51063 HTH_CRP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVATPQPQRDANPDKLELRQLLENSFHNHDLVTMAPGSPVPLLKGHIWLVVRGMTKLVTS
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHCHHHHHHHHHHHHHHC
SMNGDEALLGLVGPGEPFGEPLSQVDPYEAITLSQCDLLCLRWSEFTSNPSLSRGMLLAT
CCCCCCEEEEECCCCCCCCCCHHHCCCCCEEECCCHHHHHHHHHHHCCCCCCHHHHHHHH
AKRYRQVEALLALVGQRRVEERLRSFFELMAREYGQPCEQGVRISVRLTHQDLANLLGTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECHHHHHHHHCCH
RVTVTRFIGQLRDQGWLEVEHSRHVVVKSAQKR
HHHHHHHHHHHHCCCCEEECCCCEEEECCCCCC
>Mature Secondary Structure
MVATPQPQRDANPDKLELRQLLENSFHNHDLVTMAPGSPVPLLKGHIWLVVRGMTKLVTS
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHCHHHHHHHHHHHHHHC
SMNGDEALLGLVGPGEPFGEPLSQVDPYEAITLSQCDLLCLRWSEFTSNPSLSRGMLLAT
CCCCCCEEEEECCCCCCCCCCHHHCCCCCEEECCCHHHHHHHHHHHCCCCCCHHHHHHHH
AKRYRQVEALLALVGQRRVEERLRSFFELMAREYGQPCEQGVRISVRLTHQDLANLLGTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECHHHHHHHHCCH
RVTVTRFIGQLRDQGWLEVEHSRHVVVKSAQKR
HHHHHHHHHHHHCCCCEEECCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]