Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242848

Identifier: 148242848

GI number: 148242848

Start: 1530952

End: 1531614

Strand: Direct

Name: 148242848

Synonym: SynRCC307_1749

Alternate gene names: NA

Gene position: 1530952-1531614 (Clockwise)

Preceding gene: 148242847

Following gene: 148242849

Centisome position: 68.81

GC content: 64.56

Gene sequence:

>663_bases
GTGAGCGCCTACTGCGGCGCCCTGTGGATCGCTGCCCTGGAGGCGGCCCTCGCGATGGGCCAAACCCTGGCTTTGGAGTT
GGGGGTCGACACCGCAGCTGAACAGCGCGATTTCAGCCAGTGGCTGCAGCAATCACGGGGCAACTTCGATCAGCTGCTCT
GGAACGGCGAGTTTTACAAAATCGATGCCGAGAGCGGCACGCCGGTGGTGATGGCCGATCAGCTCTGCGGCGATTTCTAC
GCCCGCCTGCTGGGGCTGCCGCCGGTGGTGAGTGAGGCCAATGCCCGCAGCAGCTTGCAGGCGATCAAAGAGGCCTGCTT
TGAGGGCTTTGCCGGTGGCCGCTTGGGCGTCGCCAATGGCTTGCGCCGCGATGGCACCCCGCTCGATCCCAATGGCACCC
ACCCGCTGGAGGTGTGGACCGGCATCAACTTCGGTTTGGCCGCCTACTACCGGCTGATGGGCGAGACCAACACAGCGGTG
GCCATCACCCAAGCCGTGGTGAATCAGGTCTATGCAGGCGGCCTGCAATTCCGCACCCCAGAAGCCCTCACCGGGCAGAA
CACCTTCCGGGCCTGCCACTATCTGCGGGCAATGGCGATTTGGGCACTGTGGGCCACCCATACCGATTGGGAACTGATTC
CCGGCGCGGAACGGCAGCCATGA

Upstream 100 bases:

>100_bases
GGCCCTGCGCTACCTGAAAACCTTCGACATCAACAACGACGGCCTGCCCGACAACGGCGGAGCGCCGGATCAAACCTTTG
ATGATTGGGCGCTCAAAGGC

Downstream 100 bases:

>100_bases
GCCGGCTGCTGGCCGCCCTGACGCTGCTGGTGCTGACGCTGCTGCCAGCGGGCCCAGCAGCTGCTGAGCTGCATAGCCAT
CCCGGCGACAACGGAACCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MSAYCGALWIAALEAALAMGQTLALELGVDTAAEQRDFSQWLQQSRGNFDQLLWNGEFYKIDAESGTPVVMADQLCGDFY
ARLLGLPPVVSEANARSSLQAIKEACFEGFAGGRLGVANGLRRDGTPLDPNGTHPLEVWTGINFGLAAYYRLMGETNTAV
AITQAVVNQVYAGGLQFRTPEALTGQNTFRACHYLRAMAIWALWATHTDWELIPGAERQP

Sequences:

>Translated_220_residues
MSAYCGALWIAALEAALAMGQTLALELGVDTAAEQRDFSQWLQQSRGNFDQLLWNGEFYKIDAESGTPVVMADQLCGDFY
ARLLGLPPVVSEANARSSLQAIKEACFEGFAGGRLGVANGLRRDGTPLDPNGTHPLEVWTGINFGLAAYYRLMGETNTAV
AITQAVVNQVYAGGLQFRTPEALTGQNTFRACHYLRAMAIWALWATHTDWELIPGAERQP
>Mature_219_residues
SAYCGALWIAALEAALAMGQTLALELGVDTAAEQRDFSQWLQQSRGNFDQLLWNGEFYKIDAESGTPVVMADQLCGDFYA
RLLGLPPVVSEANARSSLQAIKEACFEGFAGGRLGVANGLRRDGTPLDPNGTHPLEVWTGINFGLAAYYRLMGETNTAVA
ITQAVVNQVYAGGLQFRTPEALTGQNTFRACHYLRAMAIWALWATHTDWELIPGAERQP

Specific function: Unknown

COG id: COG4354

COG function: function code G; Predicted bile acid beta-glucosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI24308251, Length=207, Percent_Identity=35.2657004830918, Blast_Score=104, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI71992715, Length=227, Percent_Identity=29.5154185022026, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI71992723, Length=227, Percent_Identity=29.5154185022026, Blast_Score=99, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI71992731, Length=227, Percent_Identity=29.5154185022026, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17562976, Length=152, Percent_Identity=32.2368421052632, Blast_Score=78, Evalue=4e-15,
Organism=Drosophila melanogaster, GI45552032, Length=214, Percent_Identity=30.8411214953271, Blast_Score=108, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23946; Mature: 23815

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAYCGALWIAALEAALAMGQTLALELGVDTAAEQRDFSQWLQQSRGNFDQLLWNGEFYK
CCCHHHHHHHHHHHHHHHHCCHHEEEECCCCHHHHHHHHHHHHHHCCCHHHEEECCEEEE
IDAESGTPVVMADQLCGDFYARLLGLPPVVSEANARSSLQAIKEACFEGFAGGRLGVANG
EECCCCCCEEEHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHCCCCCCCCHHCC
LRRDGTPLDPNGTHPLEVWTGINFGLAAYYRLMGETNTAVAITQAVVNQVYAGGLQFRTP
CCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCC
EALTGQNTFRACHYLRAMAIWALWATHTDWELIPGAERQP
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCC
>Mature Secondary Structure 
SAYCGALWIAALEAALAMGQTLALELGVDTAAEQRDFSQWLQQSRGNFDQLLWNGEFYK
CCHHHHHHHHHHHHHHHHCCHHEEEECCCCHHHHHHHHHHHHHHCCCHHHEEECCEEEE
IDAESGTPVVMADQLCGDFYARLLGLPPVVSEANARSSLQAIKEACFEGFAGGRLGVANG
EECCCCCCEEEHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHCCCCCCCCHHCC
LRRDGTPLDPNGTHPLEVWTGINFGLAAYYRLMGETNTAVAITQAVVNQVYAGGLQFRTP
CCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCC
EALTGQNTFRACHYLRAMAIWALWATHTDWELIPGAERQP
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA