| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242849
Identifier: 148242849
GI number: 148242849
Start: 1531611
End: 1532093
Strand: Direct
Name: 148242849
Synonym: SynRCC307_1750
Alternate gene names: NA
Gene position: 1531611-1532093 (Clockwise)
Preceding gene: 148242848
Following gene: 148242850
Centisome position: 68.84
GC content: 65.84
Gene sequence:
>483_bases ATGAGCCGGCTGCTGGCCGCCCTGACGCTGCTGGTGCTGACGCTGCTGCCAGCGGGCCCAGCAGCTGCTGAGCTGCATAG CCATCCCGGCGACAACGGAACCCCGGTGGTGCGCAGCCTCGAAAGCCTGCGAGATCTCGATTACCAGGCCTGGCAGCTGG TGGCCTACCGCGAAGGCGAGCCGGGCGGTGAACTCCGGCTGCGGGTGGTGGGCTACCCCGGGCGCGTCCGGCTCGATCAC CCCACCGAATTGATCGTGCTCAGCGGCAGCCACCGCTGGGATCTGCCCGATCGCACCTTGGAGAACAGCCTGCTCAAAAG CGATGGCCGGGAAGCCGCCGCTGAATTCGATCTGGCGCCGCTACTGGCTGAACTAAACAAGAACCGGCCACTGCGGCTGC AACTGCCTGGTGTGTTCAACGAACTGCCGGTGCCCCCCTTTGTGGTGAAGGAATGGCGTGAGCTGCCCACCTATCCCCTC TGA
Upstream 100 bases:
>100_bases ACACCTTCCGGGCCTGCCACTATCTGCGGGCAATGGCGATTTGGGCACTGTGGGCCACCCATACCGATTGGGAACTGATT CCCGGCGCGGAACGGCAGCC
Downstream 100 bases:
>100_bases TCGCCATTGGATGGCCAGGGCCTTGGCCCTCGCTGCCCTCGCTGATGGCCGCACCAGCCCCAACCCGCTGGTGGGCTGCG TGGTGCTTGATGCCAACGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MSRLLAALTLLVLTLLPAGPAAAELHSHPGDNGTPVVRSLESLRDLDYQAWQLVAYREGEPGGELRLRVVGYPGRVRLDH PTELIVLSGSHRWDLPDRTLENSLLKSDGREAAAEFDLAPLLAELNKNRPLRLQLPGVFNELPVPPFVVKEWRELPTYPL
Sequences:
>Translated_160_residues MSRLLAALTLLVLTLLPAGPAAAELHSHPGDNGTPVVRSLESLRDLDYQAWQLVAYREGEPGGELRLRVVGYPGRVRLDH PTELIVLSGSHRWDLPDRTLENSLLKSDGREAAAEFDLAPLLAELNKNRPLRLQLPGVFNELPVPPFVVKEWRELPTYPL >Mature_159_residues SRLLAALTLLVLTLLPAGPAAAELHSHPGDNGTPVVRSLESLRDLDYQAWQLVAYREGEPGGELRLRVVGYPGRVRLDHP TELIVLSGSHRWDLPDRTLENSLLKSDGREAAAEFDLAPLLAELNKNRPLRLQLPGVFNELPVPPFVVKEWRELPTYPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17809; Mature: 17678
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLLAALTLLVLTLLPAGPAAAELHSHPGDNGTPVVRSLESLRDLDYQAWQLVAYREGE CHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCC PGGELRLRVVGYPGRVRLDHPTELIVLSGSHRWDLPDRTLENSLLKSDGREAAAEFDLAP CCCEEEEEEECCCCEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH LLAELNKNRPLRLQLPGVFNELPVPPFVVKEWRELPTYPL HHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCC >Mature Secondary Structure SRLLAALTLLVLTLLPAGPAAAELHSHPGDNGTPVVRSLESLRDLDYQAWQLVAYREGE HHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCC PGGELRLRVVGYPGRVRLDHPTELIVLSGSHRWDLPDRTLENSLLKSDGREAAAEFDLAP CCCEEEEEEECCCCEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH LLAELNKNRPLRLQLPGVFNELPVPPFVVKEWRELPTYPL HHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA