| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is cphA [H]
Identifier: 148242823
GI number: 148242823
Start: 1509111
End: 1510958
Strand: Direct
Name: cphA [H]
Synonym: SynRCC307_1724
Alternate gene names: 148242823
Gene position: 1509111-1510958 (Clockwise)
Preceding gene: 148242821
Following gene: 148242824
Centisome position: 67.83
GC content: 61.58
Gene sequence:
>1848_bases TTGATGGGTTCCAAACACTGGCAGCAGCGCTCCTTGCGCATGGTTTCAGGCCCTTGCCTTGATGAGCCAGATGCCGTGCG TCATCCGGAGTTGCTGTTAAAGCCCGCGGCAGCGATCACAACCCTGGACTCGGCGGAGCTGCAGCAGCGGTTGCAACAGG CTCAAACCCTGAAAAATTTGCCGGCCTTCGGGCCACAGCGTGTGCTGGGGGGCAAAGAGGCCGCCATTTTTGAAGCCGCT GAGCCTCGGGGGCTGTATTGCGCGCTTTGGTGTGGGGTGTGGGCCTCCACTGCGCTGGGTCTTGGCTACCCCGCCATCAA TCCCGATCACCAAGGCGTTCGCATGCTCTGCAAAGCCTTCGCGGGTTCACCGGTGTATCTCGAGCTGATGGCAACGGCTC TCAATCTGGCGGCCGATCTACTCGAGGCCTGCATCGAGGAACCACACTCTGTGGCCACCCGCCTCCAGCCCCGCGTGCAG GCAATCCGGGAACTTGCCTCAATCAGGAGGGGGCATGGGTTCTCGAATGCATTGATTCGGGCGGCAACCCAACGGGGCAT TCCCTGCTTCCCGCTTCTACTGGAGCCAGGCTCAAACTCTCCGCTGTTGCAGTTCGGCATTGGCGCGGCATCGCGGCTGG TTCGTTCATCGGAAACCGATGCCGACTCTTCCATCGGCGCACGCATTGCCGGGTGCAAGCCGATCACATCCCAATGGCTT CAGCAACTGGGGCTGCCAACTCCCAAAACCGTGATGCTGCCGCTGCAGAGCAGTGTGTTTCAGCTTCTCGAGGCAGCAGA AAACGTGGGCTGGCCCTGCGTGGTGAAGCCCGATGCCGCAGAGAGGGGCTACGGCGTCACGGTGAACATCACAACGCCCG AGGCATTGGTGGCGGCCACGGCTCAAGCGGTTCCCTTGGCCCAGCGCGAGGTGCAGGTGCAGGCCCACTGCCCAGGCGCC TATGTGCGCCTGGTGGTGATCAACCACAGCCTGGTGCGGGCCTTGCGCAGCGAGCCGCCGTTTGTGGTGGGGGATGGGGC CGCCAGCATCATCGCCTTGATTGAGGCCAGAGCAGAAAACTGGAGCAAGCCTGACCCGATCACAAGGGAGCATTTGTATG AGCAGCCACAAGCCAACCCAGAGATCGAGCAGCATCTCGCGCAGGCCGGGTTGACGTTGCAATCGGTGCCGGAGGCCGGC CAACGCGTGGTTTTATCCAGCGAGCTGGTGGACCGCATGAATTGGGTCTACAGCGACTGGCTCGATCTGGTGCATCCCAG CGTGCAGTGGATGGCGGAATCCATCAGCCACTCGATGGCCATGCCGAACGCAGGCATTGATGTGATCACCACCGACCTCG CCGCTCCCTTGCATGAGGGCAAAACGCAGGTGATTGAAGTCAACTCCAACCAAACGCTGCAACGGCCGCAAGCCAAGTCA TTCATCGAAGCACTCTTCCCTTCAGCAGCCTCCGCTTGGATTCCGGTTGAGGTGATCGTTTGCCTCTCGGCTACCGATGC CGCCGCTCACCTCGATGCTGATCCGGTGGTGCAAGGAGGCGTGGTGGGCATTAGTCCTGCTCTGCAGGAAGCCGATAGCC GCTTGTTGGCGACGCCACTGGAGGGATGCATGCTGGTGGGTTACTGCCACCCCGATCAGCTGCTGCATAACCGCTCGATC CGCCACCTGAAAGTTCTGCTGAGCTGGCAAGAGTTCCTGGATCAGGGCTTGCCCTGTGAGCGGGTGAGCCGGGTGGTCTT GGTTGGCGAGCTGCCCGGCGCTGAGGCTGAGCGCTGGAGCACATTCGTCAACGAACTGGAAAGGTTGGGGCGCCTGAAGA GGGGTTAA
Upstream 100 bases:
>100_bases GGTGATGGTCTTGCCGTCCTCGCTGTCTCACTCGACAATGCCGCCGGCAGCGCTGCGGAAGCTGCCCATGAATCGGGGTT GACCTTGTGCGCTGGCGGGA
Downstream 100 bases:
>100_bases TTGCAGTGAACGGCAACCAATTGGTTGCTATTGCGTCAGAACTCAGTAAGTTTTCGCAAGCTGAAGCGCCCACCGGTGAA GTCTCAGTTGTTGCTGCGCA
Product: putative cyanophycin synthetase
Products: NA
Alternate protein names: Cyanophycin synthase [H]
Number of amino acids: Translated: 615; Mature: 615
Protein sequence:
>615_residues MMGSKHWQQRSLRMVSGPCLDEPDAVRHPELLLKPAAAITTLDSAELQQRLQQAQTLKNLPAFGPQRVLGGKEAAIFEAA EPRGLYCALWCGVWASTALGLGYPAINPDHQGVRMLCKAFAGSPVYLELMATALNLAADLLEACIEEPHSVATRLQPRVQ AIRELASIRRGHGFSNALIRAATQRGIPCFPLLLEPGSNSPLLQFGIGAASRLVRSSETDADSSIGARIAGCKPITSQWL QQLGLPTPKTVMLPLQSSVFQLLEAAENVGWPCVVKPDAAERGYGVTVNITTPEALVAATAQAVPLAQREVQVQAHCPGA YVRLVVINHSLVRALRSEPPFVVGDGAASIIALIEARAENWSKPDPITREHLYEQPQANPEIEQHLAQAGLTLQSVPEAG QRVVLSSELVDRMNWVYSDWLDLVHPSVQWMAESISHSMAMPNAGIDVITTDLAAPLHEGKTQVIEVNSNQTLQRPQAKS FIEALFPSAASAWIPVEVIVCLSATDAAAHLDADPVVQGGVVGISPALQEADSRLLATPLEGCMLVGYCHPDQLLHNRSI RHLKVLLSWQEFLDQGLPCERVSRVVLVGELPGAEAERWSTFVNELERLGRLKRG
Sequences:
>Translated_615_residues MMGSKHWQQRSLRMVSGPCLDEPDAVRHPELLLKPAAAITTLDSAELQQRLQQAQTLKNLPAFGPQRVLGGKEAAIFEAA EPRGLYCALWCGVWASTALGLGYPAINPDHQGVRMLCKAFAGSPVYLELMATALNLAADLLEACIEEPHSVATRLQPRVQ AIRELASIRRGHGFSNALIRAATQRGIPCFPLLLEPGSNSPLLQFGIGAASRLVRSSETDADSSIGARIAGCKPITSQWL QQLGLPTPKTVMLPLQSSVFQLLEAAENVGWPCVVKPDAAERGYGVTVNITTPEALVAATAQAVPLAQREVQVQAHCPGA YVRLVVINHSLVRALRSEPPFVVGDGAASIIALIEARAENWSKPDPITREHLYEQPQANPEIEQHLAQAGLTLQSVPEAG QRVVLSSELVDRMNWVYSDWLDLVHPSVQWMAESISHSMAMPNAGIDVITTDLAAPLHEGKTQVIEVNSNQTLQRPQAKS FIEALFPSAASAWIPVEVIVCLSATDAAAHLDADPVVQGGVVGISPALQEADSRLLATPLEGCMLVGYCHPDQLLHNRSI RHLKVLLSWQEFLDQGLPCERVSRVVLVGELPGAEAERWSTFVNELERLGRLKRG >Mature_615_residues MMGSKHWQQRSLRMVSGPCLDEPDAVRHPELLLKPAAAITTLDSAELQQRLQQAQTLKNLPAFGPQRVLGGKEAAIFEAA EPRGLYCALWCGVWASTALGLGYPAINPDHQGVRMLCKAFAGSPVYLELMATALNLAADLLEACIEEPHSVATRLQPRVQ AIRELASIRRGHGFSNALIRAATQRGIPCFPLLLEPGSNSPLLQFGIGAASRLVRSSETDADSSIGARIAGCKPITSQWL QQLGLPTPKTVMLPLQSSVFQLLEAAENVGWPCVVKPDAAERGYGVTVNITTPEALVAATAQAVPLAQREVQVQAHCPGA YVRLVVINHSLVRALRSEPPFVVGDGAASIIALIEARAENWSKPDPITREHLYEQPQANPEIEQHLAQAGLTLQSVPEAG QRVVLSSELVDRMNWVYSDWLDLVHPSVQWMAESISHSMAMPNAGIDVITTDLAAPLHEGKTQVIEVNSNQTLQRPQAKS FIEALFPSAASAWIPVEVIVCLSATDAAAHLDADPVVQGGVVGISPALQEADSRLLATPLEGCMLVGYCHPDQLLHNRSI RHLKVLLSWQEFLDQGLPCERVSRVVLVGELPGAEAERWSTFVNELERLGRLKRG
Specific function: Catalyzes the ATP-dependent polymerization of arginine and aspartate to multi-L-arginyl-poly-L-aspartic acid (cyanophycin; a water-insoluble reserve polymer) [H]
COG id: COG1181
COG function: function code M; D-alanine-D-alanine ligase and related ATP-grasp enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013651 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR011810 - InterPro: IPR004101 - InterPro: IPR013221 [H]
Pfam domain/function: PF02875 Mur_ligase_C; PF08245 Mur_ligase_M; PF08443 RimK [H]
EC number: =6.3.2.29; =6.3.2.30 [H]
Molecular weight: Translated: 66579; Mature: 66579
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMGSKHWQQRSLRMVSGPCLDEPDAVRHPELLLKPAAAITTLDSAELQQRLQQAQTLKNL CCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHHHCCCHHHHHHHHHHHHHHHCC PAFGPQRVLGGKEAAIFEAAEPRGLYCALWCGVWASTALGLGYPAINPDHQGVRMLCKAF CCCCCHHHCCCCCCEEEECCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH AGSPVYLELMATALNLAADLLEACIEEPHSVATRLQPRVQAIRELASIRRGHGFSNALIR CCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH AATQRGIPCFPLLLEPGSNSPLLQFGIGAASRLVRSSETDADSSIGARIAGCKPITSQWL HHHHCCCCEEEEEECCCCCCCEEEECCCHHHHHHHCCCCCCCHHCCCEECCCCHHHHHHH QQLGLPTPKTVMLPLQSSVFQLLEAAENVGWPCVVKPDAAERGYGVTVNITTPEALVAAT HHHCCCCCCEEEECCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEECCCHHHHHHH AQAVPLAQREVQVQAHCPGAYVRLVVINHSLVRALRSEPPFVVGDGAASIIALIEARAEN HHHCCCHHHHEEEEEECCCEEEEEEEECHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHC WSKPDPITREHLYEQPQANPEIEQHLAQAGLTLQSVPEAGQRVVLSSELVDRMNWVYSDW CCCCCCCCHHHHHCCCCCCHHHHHHHHHHCCCHHHCCCCCCEEEHHHHHHHHHHHHHHHH LDLVHPSVQWMAESISHSMAMPNAGIDVITTDLAAPLHEGKTQVIEVNSNQTLQRPQAKS HHHHCHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHCCCEEEEEECCCCCCCCCHHHH FIEALFPSAASAWIPVEVIVCLSATDAAAHLDADPVVQGGVVGISPALQEADSRLLATPL HHHHHCCCCCCCCCCEEEEEEECCCCHHHCCCCCCCCCCCCEECCHHHHHHCCCCHHCCC EGCMLVGYCHPDQLLHNRSIRHLKVLLSWQEFLDQGLPCERVSRVVLVGELPGAEAERWS CCEEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHCCEEEEECCCCCCHHHHH TFVNELERLGRLKRG HHHHHHHHHHHCCCC >Mature Secondary Structure MMGSKHWQQRSLRMVSGPCLDEPDAVRHPELLLKPAAAITTLDSAELQQRLQQAQTLKNL CCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHHHCCCHHHHHHHHHHHHHHHCC PAFGPQRVLGGKEAAIFEAAEPRGLYCALWCGVWASTALGLGYPAINPDHQGVRMLCKAF CCCCCHHHCCCCCCEEEECCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH AGSPVYLELMATALNLAADLLEACIEEPHSVATRLQPRVQAIRELASIRRGHGFSNALIR CCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH AATQRGIPCFPLLLEPGSNSPLLQFGIGAASRLVRSSETDADSSIGARIAGCKPITSQWL HHHHCCCCEEEEEECCCCCCCEEEECCCHHHHHHHCCCCCCCHHCCCEECCCCHHHHHHH QQLGLPTPKTVMLPLQSSVFQLLEAAENVGWPCVVKPDAAERGYGVTVNITTPEALVAAT HHHCCCCCCEEEECCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEECCCHHHHHHH AQAVPLAQREVQVQAHCPGAYVRLVVINHSLVRALRSEPPFVVGDGAASIIALIEARAEN HHHCCCHHHHEEEEEECCCEEEEEEEECHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHC WSKPDPITREHLYEQPQANPEIEQHLAQAGLTLQSVPEAGQRVVLSSELVDRMNWVYSDW CCCCCCCCHHHHHCCCCCCHHHHHHHHHHCCCHHHCCCCCCEEEHHHHHHHHHHHHHHHH LDLVHPSVQWMAESISHSMAMPNAGIDVITTDLAAPLHEGKTQVIEVNSNQTLQRPQAKS HHHHCHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHCCCEEEEEECCCCCCCCCHHHH FIEALFPSAASAWIPVEVIVCLSATDAAAHLDADPVVQGGVVGISPALQEADSRLLATPL HHHHHCCCCCCCCCCEEEEEEECCCCHHHCCCCCCCCCCCCEECCHHHHHHCCCCHHCCC EGCMLVGYCHPDQLLHNRSIRHLKVLLSWQEFLDQGLPCERVSRVVLVGELPGAEAERWS CCEEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHCCEEEEECCCCCCHHHHH TFVNELERLGRLKRG HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9652408 [H]