| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242821
Identifier: 148242821
GI number: 148242821
Start: 1508510
End: 1508746
Strand: Direct
Name: 148242821
Synonym: SynRCC307_1722
Alternate gene names: NA
Gene position: 1508510-1508746 (Clockwise)
Preceding gene: 148242819
Following gene: 148242823
Centisome position: 67.8
GC content: 56.12
Gene sequence:
>237_bases TTGCCGGTGATGCTCCATCCGCTCAACGCCTTCACAGGTGATGGACGCGGAGCTTTGAGGAGGGCCCTACCAACACAGCA AAAATCATTGATTTTTAATGCCAGCGCCGTACAGGCCCGCAGCCCCATCAACCGGCGTTCTGTTCAGGGCTGGCGCCGTA CTGCCGATGTGCTGGAACCAGCCCGGAAATGCTTGATCAGAAGCGGACTGTTTGATTCAACTGCCTTAACGGTGTGA
Upstream 100 bases:
>100_bases GCCCTGTTCATGCCGCCGGTGCAAACCGTCATTGACCCCAACAAGCAAGAGCGGATTGCAGTTCAAAATGCCGCAACTGA ATGCCTGATGCAGAACGGTG
Downstream 100 bases:
>100_bases ACAGGCCTGAGGGCTTGTGCTTAGAAATCGATCTTGGTTTCCCCGCCGCCGCCGCCTTTGCCGGTGTCGGTGTTGGGGTC GGTGTTGGGCCCAGCCAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MPVMLHPLNAFTGDGRGALRRALPTQQKSLIFNASAVQARSPINRRSVQGWRRTADVLEPARKCLIRSGLFDSTALTV
Sequences:
>Translated_78_residues MPVMLHPLNAFTGDGRGALRRALPTQQKSLIFNASAVQARSPINRRSVQGWRRTADVLEPARKCLIRSGLFDSTALTV >Mature_77_residues PVMLHPLNAFTGDGRGALRRALPTQQKSLIFNASAVQARSPINRRSVQGWRRTADVLEPARKCLIRSGLFDSTALTV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8588; Mature: 8457
Theoretical pI: Translated: 12.33; Mature: 12.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVMLHPLNAFTGDGRGALRRALPTQQKSLIFNASAVQARSPINRRSVQGWRRTADVLEP CCEEECCCCCCCCCCHHHHHHHCCCCCHHEECCCHHHHHCCCCCHHHHHHHHHHHHHHHH ARKCLIRSGLFDSTALTV HHHHHHHCCCCCCCCCCC >Mature Secondary Structure PVMLHPLNAFTGDGRGALRRALPTQQKSLIFNASAVQARSPINRRSVQGWRRTADVLEP CEEECCCCCCCCCCHHHHHHHCCCCCHHEECCCHHHHHCCCCCHHHHHHHHHHHHHHHH ARKCLIRSGLFDSTALTV HHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA