Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is yhhW [C]

Identifier: 148242668

GI number: 148242668

Start: 1387064

End: 1387777

Strand: Direct

Name: yhhW [C]

Synonym: SynRCC307_1569

Alternate gene names: 148242668

Gene position: 1387064-1387777 (Clockwise)

Preceding gene: 148242667

Following gene: 148242669

Centisome position: 62.34

GC content: 63.31

Gene sequence:

>714_bases
ATGACCACACCCCCTCTGCGCAGCCTGGGCCGCTTGCGGCCTGCTGCAGAACGCTTCCACAGCCAGCTCGATTGGCTCGA
TAGCTGGCATAGCTTCAGCTTTTCGCACCACCACGACCCCGATTGGATGGGTTTTGGTCCGCTGCGAGTGATCAATGACG
ACACGATCGCCCCAGGCCAAGGCTTTGGCATGCACCCGCACCAGAGCATGGAAATCATCACCGTGATGGTGGAAGGTGAG
CTCACCCATCAAGACTCCATGGGTCACCGCGAAGTGCTCCGCGCCGGCGAGGTGCAGCGCATGAGCGCCGGCCGAGGCGT
GGTGCACAGCGAAATCAACCAATCCGCCTCCCCCTGCCGGCTCCTGCAGATCTGGGTGGAACCGCAAACCCCTGGGGGAG
ATCCGCAATACGAGCAGAAGCCGTTTGCCATTGCAGAGGGCTGGACCTGCCTGCTGGATCCCAGCGGTGAGGCGGAGGCC
ATGGCCATTCAGCGGCCGGTGCGGCTCTGGCGCAGCCAACCGCAACCAGGAATCCCCCTGGAACTGCCGCTGCAGCCCAA
CCGGCAGGGGTGGCTGCAGCTGATCGATGGCGCCATCACACTGGATGGGCAATTGCTGCAACGGGGTGATGGTTTGGGCT
TCGAGGGCGCACCGGGGCAAACCATCGTGAGCAGCAGCACTGGCACCGACCTGCTGCTGTTTGAACTGCAATGA

Upstream 100 bases:

>100_bases
GCTCAGCAATTTCGCCAAGCCAGCCAAAGACGACTCCATCCAAGACTTGCTGCGCCGCCTGATGCAGATGCAACCACTCG
CGTTGGGCACCTGAGCAGCG

Downstream 100 bases:

>100_bases
GCGCCTGGCAGCGCCAGCTCACCGTTCCGCAGTTCACCGTTGTCAGCGGTTTGCTGGTGATTGCCCTTGGCACGCTGCTG
CTGGCCACGCCGCTGTGCTC

Product: putative Pirin-related protein

Products: NA

Alternate protein names: Putative quercetinase; Pirin-like protein sll1773 [H]

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MTTPPLRSLGRLRPAAERFHSQLDWLDSWHSFSFSHHHDPDWMGFGPLRVINDDTIAPGQGFGMHPHQSMEIITVMVEGE
LTHQDSMGHREVLRAGEVQRMSAGRGVVHSEINQSASPCRLLQIWVEPQTPGGDPQYEQKPFAIAEGWTCLLDPSGEAEA
MAIQRPVRLWRSQPQPGIPLELPLQPNRQGWLQLIDGAITLDGQLLQRGDGLGFEGAPGQTIVSSSTGTDLLLFELQ

Sequences:

>Translated_237_residues
MTTPPLRSLGRLRPAAERFHSQLDWLDSWHSFSFSHHHDPDWMGFGPLRVINDDTIAPGQGFGMHPHQSMEIITVMVEGE
LTHQDSMGHREVLRAGEVQRMSAGRGVVHSEINQSASPCRLLQIWVEPQTPGGDPQYEQKPFAIAEGWTCLLDPSGEAEA
MAIQRPVRLWRSQPQPGIPLELPLQPNRQGWLQLIDGAITLDGQLLQRGDGLGFEGAPGQTIVSSSTGTDLLLFELQ
>Mature_236_residues
TTPPLRSLGRLRPAAERFHSQLDWLDSWHSFSFSHHHDPDWMGFGPLRVINDDTIAPGQGFGMHPHQSMEIITVMVEGEL
THQDSMGHREVLRAGEVQRMSAGRGVVHSEINQSASPCRLLQIWVEPQTPGGDPQYEQKPFAIAEGWTCLLDPSGEAEAM
AIQRPVRLWRSQPQPGIPLELPLQPNRQGWLQLIDGAITLDGQLLQRGDGLGFEGAPGQTIVSSSTGTDLLLFELQ

Specific function: Putative quercetin 2,3-dioxygenase [H]

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family [H]

Homologues:

Organism=Escherichia coli, GI1789847, Length=226, Percent_Identity=41.5929203539823, Blast_Score=184, Evalue=4e-48,
Organism=Escherichia coli, GI1789493, Length=116, Percent_Identity=33.6206896551724, Blast_Score=77, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR003829
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02678 Pirin [H]

EC number: =1.13.11.24 [H]

Molecular weight: Translated: 26275; Mature: 26144

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPPLRSLGRLRPAAERFHSQLDWLDSWHSFSFSHHHDPDWMGFGPLRVINDDTIAPGQ
CCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCC
GFGMHPHQSMEIITVMVEGELTHQDSMGHREVLRAGEVQRMSAGRGVVHSEINQSASPCR
CCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHCCCHHHHHCCCCHHHHHHCCCCCCEE
LLQIWVEPQTPGGDPQYEQKPFAIAEGWTCLLDPSGEAEAMAIQRPVRLWRSQPQPGIPL
EEEEEECCCCCCCCCCCCCCCEEEECCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCE
ELPLQPNRQGWLQLIDGAITLDGQLLQRGDGLGFEGAPGQTIVSSSTGTDLLLFELQ
ECCCCCCHHHHHHHHCCEEEECHHHHHCCCCCCCCCCCCCEEEECCCCCEEEEEEEC
>Mature Secondary Structure 
TTPPLRSLGRLRPAAERFHSQLDWLDSWHSFSFSHHHDPDWMGFGPLRVINDDTIAPGQ
CCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCC
GFGMHPHQSMEIITVMVEGELTHQDSMGHREVLRAGEVQRMSAGRGVVHSEINQSASPCR
CCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHCCCHHHHHCCCCHHHHHHCCCCCCEE
LLQIWVEPQTPGGDPQYEQKPFAIAEGWTCLLDPSGEAEAMAIQRPVRLWRSQPQPGIPL
EEEEEECCCCCCCCCCCCCCCEEEECCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCE
ELPLQPNRQGWLQLIDGAITLDGQLLQRGDGLGFEGAPGQTIVSSSTGTDLLLFELQ
ECCCCCCHHHHHHHHCCEEEECHHHHHCCCCCCCCCCCCCEEEECCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]