| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242661
Identifier: 148242661
GI number: 148242661
Start: 1380408
End: 1381061
Strand: Direct
Name: 148242661
Synonym: SynRCC307_1562
Alternate gene names: NA
Gene position: 1380408-1381061 (Clockwise)
Preceding gene: 148242660
Following gene: 148242662
Centisome position: 62.04
GC content: 63.46
Gene sequence:
>654_bases ATGACCTTGCCACTTCCTGCTTACGAGCCTCTGCCCGAGGCGCCCCAAGCAGCCAGTGATCTCATCGAAGTGGCGATTGC GGCGCTCCATCCCACCCAACTGTGTGTGGGCATGGCTGAGATCCAGCACCGCATCGCTGACTTCCAAAACGAATCCCCCA AGGAGCGCCGGCGCTATTTGAAAACCAAGCCGATTCCGTTGGTGCGCAGCTCAGCGGGCGAGCTCTGGATGGTGGATCGC CATCACCGCCTGCGGGGGCTACTAGCGGTGGATCCCGAGGCCACCGGCTGGGGCTACATCGCCCTGGATCTGCCCTTCAA CAACCGCAGCGCCGTGCTGCAGGCCTTGCAACAGCGCGGCTGGCTTTACCTCTATGACGGCCGGGGGCTCGGACCACTGG CACCAGAAGAACTTCCCGAGACCCTGCTGGGCTGCCAAGACGACCCCTACCGCAGCTTGGTGTGGAAGCTGAAGCGCGAA GGCGTGATTGATCGCGCTCCGCTGATTCCCTTCCATGAATTTCGCTGGGCGGCCTGGCTCAGGCGCAAAGCATTGCCGCC CTTCAACTCACAACAACTGGAGCCAGCTCTGCCAGCAGCCAGGGCCTATGCCCGCTCGGCCGCTGCCTCTCGCATGGCCG GCTGGAAAGGCTGA
Upstream 100 bases:
>100_bases TCGAGACCGCCCTCGGGCGCCATCACACCGTTAGGGACCAGGCCGTCAGGCCTGAGCATTAGAAGGGCCTCCGCCTGGCG GGGGCCCTTACGCTTTTGCC
Downstream 100 bases:
>100_bases TCAGAAGCAAAACGGAAGCTAGCGCCACCGCTTCAATTTCATATCAAGAATTGAAAGACTTACACCACTATCTGGGAGGG TCCTGCGATGGCTCCCACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MTLPLPAYEPLPEAPQAASDLIEVAIAALHPTQLCVGMAEIQHRIADFQNESPKERRRYLKTKPIPLVRSSAGELWMVDR HHRLRGLLAVDPEATGWGYIALDLPFNNRSAVLQALQQRGWLYLYDGRGLGPLAPEELPETLLGCQDDPYRSLVWKLKRE GVIDRAPLIPFHEFRWAAWLRRKALPPFNSQQLEPALPAARAYARSAAASRMAGWKG
Sequences:
>Translated_217_residues MTLPLPAYEPLPEAPQAASDLIEVAIAALHPTQLCVGMAEIQHRIADFQNESPKERRRYLKTKPIPLVRSSAGELWMVDR HHRLRGLLAVDPEATGWGYIALDLPFNNRSAVLQALQQRGWLYLYDGRGLGPLAPEELPETLLGCQDDPYRSLVWKLKRE GVIDRAPLIPFHEFRWAAWLRRKALPPFNSQQLEPALPAARAYARSAAASRMAGWKG >Mature_216_residues TLPLPAYEPLPEAPQAASDLIEVAIAALHPTQLCVGMAEIQHRIADFQNESPKERRRYLKTKPIPLVRSSAGELWMVDRH HRLRGLLAVDPEATGWGYIALDLPFNNRSAVLQALQQRGWLYLYDGRGLGPLAPEELPETLLGCQDDPYRSLVWKLKREG VIDRAPLIPFHEFRWAAWLRRKALPPFNSQQLEPALPAARAYARSAAASRMAGWKG
Specific function: Unknown
COG id: COG4318
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24443; Mature: 24312
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPLPAYEPLPEAPQAASDLIEVAIAALHPTQLCVGMAEIQHRIADFQNESPKERRRYL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH KTKPIPLVRSSAGELWMVDRHHRLRGLLAVDPEATGWGYIALDLPFNNRSAVLQALQQRG CCCCCCCEECCCCCEEEECCHHHHCCEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHCC WLYLYDGRGLGPLAPEELPETLLGCQDDPYRSLVWKLKREGVIDRAPLIPFHEFRWAAWL CEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH RRKALPPFNSQQLEPALPAARAYARSAAASRMAGWKG HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TLPLPAYEPLPEAPQAASDLIEVAIAALHPTQLCVGMAEIQHRIADFQNESPKERRRYL CCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH KTKPIPLVRSSAGELWMVDRHHRLRGLLAVDPEATGWGYIALDLPFNNRSAVLQALQQRG CCCCCCCEECCCCCEEEECCHHHHCCEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHCC WLYLYDGRGLGPLAPEELPETLLGCQDDPYRSLVWKLKREGVIDRAPLIPFHEFRWAAWL CEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH RRKALPPFNSQQLEPALPAARAYARSAAASRMAGWKG HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA