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The map label for this gene is chlN

Identifier: 148242663

GI number: 148242663

Start: 1382067

End: 1383305

Strand: Direct

Name: chlN

Synonym: SynRCC307_1564

Alternate gene names: 148242663

Gene position: 1382067-1383305 (Clockwise)

Preceding gene: 148242662

Following gene: 148242664

Centisome position: 62.12

GC content: 62.87

Gene sequence:

>1239_bases
TTGCAGTTGCAACTGCTTAAAGAGAGCGGTCAGAGAGAAGTTTTCTGCGGCCTCACCTCCATTGTTTGGCTGCACCGGCG
CATGCCGGATGCCTTTTTTCTGGTGGTGGGCTCACGCACCTGCGCACACCTGATCCAAAGCGCCGCCGGCGTGATGATCT
TTGCCGAACCCCGCTTTGGCACCGCAATCCTTGGCGAACGGGATCTCGCGGGCCTCGCCGATGCCAACGAGGAACTCGAC
AGGGTGGTGGCTGATCTGCTGCAACGGCGGCCCGAAATCCGCACCCTCTTTTTGGTGGGATCGTGCCCGAGCGAAGTGAT
CAAGCTGGATCTCAGCAAAGCCGCTGAGCGCCTCAATCAGCAGCATCGCGGCCGCGTGCAAGTGGTGAACTACAGCGGCA
GTGGCATCGAAACCACCTTCACCCAAGGGGAAGACCAGGCGTTAACCGCCCTGGTGCCATTGATGCCGCAAAGCACAACG
CCGCAGCTGCTGTTGGTGGGCACCCTGGCTGATGGCGTGGAAGAGCGCTTCCTGACGCTGTTTGAGCGCCTTGGGATTGG
CCCTGTCGCCAGCCTGCCGCCGCGACGTTCCACCGAGCTGCCAGCCGTTGGCCCAGGCACCAAGCTTCTGCTCACCCAAC
CCTTTTTGGGGCAAACAGCCAGGGCCCTGCAAGCCAAAGGCGCTGAGCTGATCAGTAGCCCCTACCCCCTCGGCGTTGAA
GGCAGCGAGTTGTGGTTCCGGGCTGCTGCCAGGGCCTTTGGCATCAGCGATGAGCACACCACCTCCGTGCTCGAGCCGCT
GGTGACCCGAGGGCGTGCGGCTTTGGAACCCCACCGCAAAGCCCTGGAGGGCAAACGCCTGTTCCTGTTGCCGGATTCCC
AAATGGAGCTGGCCCTCGGGCGCTTCCTGCAACGGGAATGCGGCATGGAGTTGGTGGAGGTTGGAACTCCCTATCTCGAT
CGCGCCCTGCAGCAGGAGGAGCTCGATCTACTGCCCGCTGATGTGCAACTCAGCGAAGGCCAAAACGTGGAGGAGCAGTT
GCAGCGGGTTCGTCAGAGCCATCCCGATTTGGTGGTCTGCGGCATGGGACTCGCCAACCCGCTGGAAGCCGAGGGGATCA
CCACCAAATGGTCGATCGAGCTGGTCTTCAGCCCGATCCATGGCTGCGATCAAGCCGGCGATTTGGCGGAGCTCTTCGCC
CGACCCCTGCGCCGCCGCGGCGCCCTCACCTTCGCCTGA

Upstream 100 bases:

>100_bases
CGGAATCAGCTACTGGTTTGTCACCAATCCCGAGCGATCCCTGTAAAGCAATCGTGGCCTAGAAGCGCTCACCAGAGCTA
AGAAGGGGAGTTCATGGAGA

Downstream 100 bases:

>100_bases
GCGCCATGGAACTCACCCTTTGGACCTATGAGGGCCCACCCCATGTGGGCGCCATGCGCATCGCGGCCTCGATGCAGGGG
GTGCACTACGTGCTCCACGC

Product: light-independent protochlorophyllide reductase subunit N

Products: NA

Alternate protein names: DPOR subunit N; LI-POR subunit N

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MQLQLLKESGQREVFCGLTSIVWLHRRMPDAFFLVVGSRTCAHLIQSAAGVMIFAEPRFGTAILGERDLAGLADANEELD
RVVADLLQRRPEIRTLFLVGSCPSEVIKLDLSKAAERLNQQHRGRVQVVNYSGSGIETTFTQGEDQALTALVPLMPQSTT
PQLLLVGTLADGVEERFLTLFERLGIGPVASLPPRRSTELPAVGPGTKLLLTQPFLGQTARALQAKGAELISSPYPLGVE
GSELWFRAAARAFGISDEHTTSVLEPLVTRGRAALEPHRKALEGKRLFLLPDSQMELALGRFLQRECGMELVEVGTPYLD
RALQQEELDLLPADVQLSEGQNVEEQLQRVRQSHPDLVVCGMGLANPLEAEGITTKWSIELVFSPIHGCDQAGDLAELFA
RPLRRRGALTFA

Sequences:

>Translated_412_residues
MQLQLLKESGQREVFCGLTSIVWLHRRMPDAFFLVVGSRTCAHLIQSAAGVMIFAEPRFGTAILGERDLAGLADANEELD
RVVADLLQRRPEIRTLFLVGSCPSEVIKLDLSKAAERLNQQHRGRVQVVNYSGSGIETTFTQGEDQALTALVPLMPQSTT
PQLLLVGTLADGVEERFLTLFERLGIGPVASLPPRRSTELPAVGPGTKLLLTQPFLGQTARALQAKGAELISSPYPLGVE
GSELWFRAAARAFGISDEHTTSVLEPLVTRGRAALEPHRKALEGKRLFLLPDSQMELALGRFLQRECGMELVEVGTPYLD
RALQQEELDLLPADVQLSEGQNVEEQLQRVRQSHPDLVVCGMGLANPLEAEGITTKWSIELVFSPIHGCDQAGDLAELFA
RPLRRRGALTFA
>Mature_412_residues
MQLQLLKESGQREVFCGLTSIVWLHRRMPDAFFLVVGSRTCAHLIQSAAGVMIFAEPRFGTAILGERDLAGLADANEELD
RVVADLLQRRPEIRTLFLVGSCPSEVIKLDLSKAAERLNQQHRGRVQVVNYSGSGIETTFTQGEDQALTALVPLMPQSTT
PQLLLVGTLADGVEERFLTLFERLGIGPVASLPPRRSTELPAVGPGTKLLLTQPFLGQTARALQAKGAELISSPYPLGVE
GSELWFRAAARAFGISDEHTTSVLEPLVTRGRAALEPHRKALEGKRLFLLPDSQMELALGRFLQRECGMELVEVGTPYLD
RALQQEELDLLPADVQLSEGQNVEEQLQRVRQSHPDLVVCGMGLANPLEAEGITTKWSIELVFSPIHGCDQAGDLAELFA
RPLRRRGALTFA

Specific function: Uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent

COG id: COG2710

COG function: function code C; Nitrogenase molybdenum-iron protein, alpha and beta chains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BchN/ChlN family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CHLN_SYNR3 (A5GUA8)

Other databases:

- EMBL:   CT978603
- RefSeq:   YP_001227820.1
- STRING:   A5GUA8
- GeneID:   5158177
- GenomeReviews:   CT978603_GR
- KEGG:   syr:SynRCC307_1564
- eggNOG:   COG2710
- HOGENOM:   HBG361243
- OMA:   MIFAEPR
- ProtClustDB:   PRK02842
- HAMAP:   MF_00352
- InterPro:   IPR000510
- InterPro:   IPR005970
- PIRSF:   PIRSF000162
- TIGRFAMs:   TIGR01279

Pfam domain/function: PF00148 Oxidored_nitro

EC number: 1.18.-.-

Molecular weight: Translated: 45139; Mature: 45139

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLQLLKESGQREVFCGLTSIVWLHRRMPDAFFLVVGSRTCAHLIQSAAGVMIFAEPRFG
CCCEEEHHCCCCEEHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCEEEEECCCCC
TAILGERDLAGLADANEELDRVVADLLQRRPEIRTLFLVGSCPSEVIKLDLSKAAERLNQ
EEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHH
QHRGRVQVVNYSGSGIETTFTQGEDQALTALVPLMPQSTTPQLLLVGTLADGVEERFLTL
HHCCCEEEEEECCCCCEEEECCCCCHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHH
FERLGIGPVASLPPRRSTELPAVGPGTKLLLTQPFLGQTARALQAKGAELISSPYPLGVE
HHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCHHHHCCCCCCCCC
GSELWFRAAARAFGISDEHTTSVLEPLVTRGRAALEPHRKALEGKRLFLLPDSQMELALG
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHCCHHHHHHCCCEEEEECCCHHHHHHH
RFLQRECGMELVEVGTPYLDRALQQEELDLLPADVQLSEGQNVEEQLQRVRQSHPDLVVC
HHHHHHHCCHHHHHCCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHCCCCEEEE
GMGLANPLEAEGITTKWSIELVFSPIHGCDQAGDLAELFARPLRRRGALTFA
CCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQLQLLKESGQREVFCGLTSIVWLHRRMPDAFFLVVGSRTCAHLIQSAAGVMIFAEPRFG
CCCEEEHHCCCCEEHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCEEEEECCCCC
TAILGERDLAGLADANEELDRVVADLLQRRPEIRTLFLVGSCPSEVIKLDLSKAAERLNQ
EEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHH
QHRGRVQVVNYSGSGIETTFTQGEDQALTALVPLMPQSTTPQLLLVGTLADGVEERFLTL
HHCCCEEEEEECCCCCEEEECCCCCHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHH
FERLGIGPVASLPPRRSTELPAVGPGTKLLLTQPFLGQTARALQAKGAELISSPYPLGVE
HHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCHHHHCCCCCCCCC
GSELWFRAAARAFGISDEHTTSVLEPLVTRGRAALEPHRKALEGKRLFLLPDSQMELALG
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHCCHHHHHHCCCEEEEECCCHHHHHHH
RFLQRECGMELVEVGTPYLDRALQQEELDLLPADVQLSEGQNVEEQLQRVRQSHPDLVVC
HHHHHHHCCHHHHHCCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHCCCCEEEE
GMGLANPLEAEGITTKWSIELVFSPIHGCDQAGDLAELFARPLRRRGALTFA
CCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA