Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is paaY [C]

Identifier: 148242638

GI number: 148242638

Start: 1357443

End: 1357943

Strand: Direct

Name: paaY [C]

Synonym: SynRCC307_1539

Alternate gene names: 148242638

Gene position: 1357443-1357943 (Clockwise)

Preceding gene: 148242636

Following gene: 148242639

Centisome position: 61.01

GC content: 67.66

Gene sequence:

>501_bases
ATGAGCTCTGCTCCCTGGCCTCAGCCCAACCTCCGCAACGCCGCCTGGGTGGCACCGAGCGCTGTGGTGATTGGTGATGT
TCAGCTGGAGGCAGGCGCCAGCCTCTGGCCCACCGCCGTGGCCCGTGGGGACCTCGCCAGCATCCGCATTGGCGAAGGCA
GCAATGTTCAAGACGGGGCCGTGCTGCACGGCGATCCAGGTGATCCGGTGCTGATTGGCCGCGATGTGACCATCGGCCAC
CGGGCCGTCATCCATGGCGCCACCCTCAACGACGGCTGCCTCATCGGCATCGGCGCCATCGTTCTCAATGGCGTGACCGT
GGGGGCCGGCGCCCTGGTGGCAGCTGGGGCTGTGGTGACCAAAGATGTGCCGGCCGGCGCCCTGGTGATGGGCGCACCAG
CAGCGGTCAAGCGAGAACTCAGTTCTGACGCGGTAGCCGGCCAACGCAGCCATGCCCAGCACTACCGCCAGCTCGCTGAA
CAGCACGCGGCTTTGGGCTGA

Upstream 100 bases:

>100_bases
CAGGACCAGCCGGTTAAAAGCCGGATGCTCTACCGCTGAGCTAGCGACCCGTGCCCCAAGGGGCGAAACCGAAAATTATC
ACGCGCACCACCCCAGCCCC

Downstream 100 bases:

>100_bases
GTTGCCAGCGAATTGCTGCAAAAGGCAAAAGGCCTTCCAGCAACTGCGGATTATTCCGTAGGATCAGCGCCGTTTTGTGC
TGCTAGCCCATGGATCTCCG

Product: carbonic anhydrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MSSAPWPQPNLRNAAWVAPSAVVIGDVQLEAGASLWPTAVARGDLASIRIGEGSNVQDGAVLHGDPGDPVLIGRDVTIGH
RAVIHGATLNDGCLIGIGAIVLNGVTVGAGALVAAGAVVTKDVPAGALVMGAPAAVKRELSSDAVAGQRSHAQHYRQLAE
QHAALG

Sequences:

>Translated_166_residues
MSSAPWPQPNLRNAAWVAPSAVVIGDVQLEAGASLWPTAVARGDLASIRIGEGSNVQDGAVLHGDPGDPVLIGRDVTIGH
RAVIHGATLNDGCLIGIGAIVLNGVTVGAGALVAAGAVVTKDVPAGALVMGAPAAVKRELSSDAVAGQRSHAQHYRQLAE
QHAALG
>Mature_165_residues
SSAPWPQPNLRNAAWVAPSAVVIGDVQLEAGASLWPTAVARGDLASIRIGEGSNVQDGAVLHGDPGDPVLIGRDVTIGHR
AVIHGATLNDGCLIGIGAIVLNGVTVGAGALVAAGAVVTKDVPAGALVMGAPAAVKRELSSDAVAGQRSHAQHYRQLAEQ
HAALG

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=167, Percent_Identity=35.3293413173653, Blast_Score=112, Evalue=1e-26,
Organism=Escherichia coli, GI1787667, Length=152, Percent_Identity=36.8421052631579, Blast_Score=109, Evalue=9e-26,
Organism=Escherichia coli, GI87081681, Length=152, Percent_Identity=33.5526315789474, Blast_Score=94, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16590; Mature: 16459

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00101 HEXAPEP_TRANSFERASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSAPWPQPNLRNAAWVAPSAVVIGDVQLEAGASLWPTAVARGDLASIRIGEGSNVQDGA
CCCCCCCCCCCCCCEEECCCEEEEEEEEECCCCCCCCHHHCCCCEEEEEECCCCCCCCCE
VLHGDPGDPVLIGRDVTIGHRAVIHGATLNDGCLIGIGAIVLNGVTVGAGALVAAGAVVT
EEECCCCCCEEEECCCCCCCEEEEECCCCCCCEEEEEHHHHHCCCCCCCHHHHHCCCCEE
KDVPAGALVMGAPAAVKRELSSDAVAGQRSHAQHYRQLAEQHAALG
CCCCCCEEEECCCHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSAPWPQPNLRNAAWVAPSAVVIGDVQLEAGASLWPTAVARGDLASIRIGEGSNVQDGA
CCCCCCCCCCCCCEEECCCEEEEEEEEECCCCCCCCHHHCCCCEEEEEECCCCCCCCCE
VLHGDPGDPVLIGRDVTIGHRAVIHGATLNDGCLIGIGAIVLNGVTVGAGALVAAGAVVT
EEECCCCCCEEEECCCCCCCEEEEECCCCCCCEEEEEHHHHHCCCCCCCHHHHHCCCCEE
KDVPAGALVMGAPAAVKRELSSDAVAGQRSHAQHYRQLAEQHAALG
CCCCCCEEEECCCHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]