Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242627

Identifier: 148242627

GI number: 148242627

Start: 1352244

End: 1352549

Strand: Direct

Name: 148242627

Synonym: SynRCC307_1528

Alternate gene names: NA

Gene position: 1352244-1352549 (Clockwise)

Preceding gene: 148242626

Following gene: 148242631

Centisome position: 60.78

GC content: 57.84

Gene sequence:

>306_bases
TTGGGAAGAGCTCCTGGGTCGCAAGTGAATCCAAAGCAAGCCCTTGTCTTACTGGCGAGTTGGAGCTTGCTCTTGAGTGG
CCTTGCCGCTTGTTCAACTGCTGATCAAAACGACATCAGCGCAGCCGATGCACAGGCCCATGCCGACAGCATCTGCTTAA
CCAGTCAGCAGCTTGATCGCGACAGCGCACAGTTGATGGCGGACATGGCTGATGCGATGGCCGCGGAACCGGGAGTCAAA
GATCAACCGACACGGACGGCGATCGCTGGTACGGCAATCGCCCGATCACGCGGCTGCGTGGATTAA

Upstream 100 bases:

>100_bases
GCTATTTGAGCCAGCCTAAAACCAAAAAAGAAAAGAGCTTTGCCCCAACCGCAACGACCAAGCGATCGGCAGCCGTGAAA
ACCCCCAGCGCAGATTTGAA

Downstream 100 bases:

>100_bases
ATCAGCTTTTGCACTGAATGGATTGACGCCCTGTGCCCTGAGAGAAGTCCAAGCTGTAGGGCGCCGGCACCTTGGCAATC
AGCCAACTCTCGCCGAAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MGRAPGSQVNPKQALVLLASWSLLLSGLAACSTADQNDISAADAQAHADSICLTSQQLDRDSAQLMADMADAMAAEPGVK
DQPTRTAIAGTAIARSRGCVD

Sequences:

>Translated_101_residues
MGRAPGSQVNPKQALVLLASWSLLLSGLAACSTADQNDISAADAQAHADSICLTSQQLDRDSAQLMADMADAMAAEPGVK
DQPTRTAIAGTAIARSRGCVD
>Mature_100_residues
GRAPGSQVNPKQALVLLASWSLLLSGLAACSTADQNDISAADAQAHADSICLTSQQLDRDSAQLMADMADAMAAEPGVKD
QPTRTAIAGTAIARSRGCVD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10327; Mature: 10195

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRAPGSQVNPKQALVLLASWSLLLSGLAACSTADQNDISAADAQAHADSICLTSQQLDR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCH
DSAQLMADMADAMAAEPGVKDQPTRTAIAGTAIARSRGCVD
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
GRAPGSQVNPKQALVLLASWSLLLSGLAACSTADQNDISAADAQAHADSICLTSQQLDR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCH
DSAQLMADMADAMAAEPGVKDQPTRTAIAGTAIARSRGCVD
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA