| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242625
Identifier: 148242625
GI number: 148242625
Start: 1351267
End: 1352025
Strand: Direct
Name: 148242625
Synonym: SynRCC307_1526
Alternate gene names: NA
Gene position: 1351267-1352025 (Clockwise)
Preceding gene: 148242624
Following gene: 148242626
Centisome position: 60.73
GC content: 61.26
Gene sequence:
>759_bases GTGGATCAGTGGCGAAGGAATCACTGGCCAGCTGCTGGGCGTTCTGCAGTGGTATCTGAACCTGGGCTGACCATGGACGT TCTCGAGCTGTTCCCTCGGCACATCCTGGAAGGGGATCTAGAGCCGGCCCTGCTGACCCCCCTGCAGCGCCATGCCAAGG CCGTGCTGCAGCAACCGGAACGCAGCCCCGATGCCTCGGCAAAGTTGGCAGGGCAGCTCACCCAGCAACGGGAGCTCTCC CTGCAGGAGCCAGCCGTCGCCGAGCTGTGCAGCAGCGTTCTTTTGCCCGGTTGTGAACGCTGGATCCGCCATGTGATCGA CAAACAGCCCCCCCAAGGGCGCGGGCCATGGACACCGGGTCGTTATCAGTTGCGGATGGTGGATGTTTGGCTCAACAGCC AGCAAGCCGGTGATTACAACCCCACCCACACCCACGGCGGCAGCTTTTCAGGGGTGATTTTTCTGCAGGTGCCACCGCAG ATCAACGGCGAGAGCTTCGATGGCCAACTCTGTTTTCATGGCCCAGAGGAGTGGCACATTCAGAGCTTCCGCACGGGAAT GGCCCACTACGTGTTGCCCAAACCGGGCCGCTTTTACATCTTTCCGGCATGGCAACCGCACTCGGTCATGCCCTTTCGGG GCGATGGGGCGCGGTGGTCTTTGGCCTTCAATGTGATGGCCATTCCTCAGCCGGCAGGCAACACAACAGCACGCAATCTC TCGCTATCCAGCAATCGCCCACGCCGGCAAGGATTTTGA
Upstream 100 bases:
>100_bases TCACCACAGCCAAACCTTGGAACAAGCAGGCCTTGGTGGTGGTGGAACGTCTCAATGGTCGCGTGGCCATGGTGGGATTC AGCGCCGCTGTGGTGGGGGA
Downstream 100 bases:
>100_bases AATCCAAACAAAGTCAACCAATTGGTGTTTTAAAACACCCTTTTTTGGTTGTTAGACATTAAAAATTAAAAACCCCATCA CCCAACCATGAGCCAGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MDQWRRNHWPAAGRSAVVSEPGLTMDVLELFPRHILEGDLEPALLTPLQRHAKAVLQQPERSPDASAKLAGQLTQQRELS LQEPAVAELCSSVLLPGCERWIRHVIDKQPPQGRGPWTPGRYQLRMVDVWLNSQQAGDYNPTHTHGGSFSGVIFLQVPPQ INGESFDGQLCFHGPEEWHIQSFRTGMAHYVLPKPGRFYIFPAWQPHSVMPFRGDGARWSLAFNVMAIPQPAGNTTARNL SLSSNRPRRQGF
Sequences:
>Translated_252_residues MDQWRRNHWPAAGRSAVVSEPGLTMDVLELFPRHILEGDLEPALLTPLQRHAKAVLQQPERSPDASAKLAGQLTQQRELS LQEPAVAELCSSVLLPGCERWIRHVIDKQPPQGRGPWTPGRYQLRMVDVWLNSQQAGDYNPTHTHGGSFSGVIFLQVPPQ INGESFDGQLCFHGPEEWHIQSFRTGMAHYVLPKPGRFYIFPAWQPHSVMPFRGDGARWSLAFNVMAIPQPAGNTTARNL SLSSNRPRRQGF >Mature_252_residues MDQWRRNHWPAAGRSAVVSEPGLTMDVLELFPRHILEGDLEPALLTPLQRHAKAVLQQPERSPDASAKLAGQLTQQRELS LQEPAVAELCSSVLLPGCERWIRHVIDKQPPQGRGPWTPGRYQLRMVDVWLNSQQAGDYNPTHTHGGSFSGVIFLQVPPQ INGESFDGQLCFHGPEEWHIQSFRTGMAHYVLPKPGRFYIFPAWQPHSVMPFRGDGARWSLAFNVMAIPQPAGNTTARNL SLSSNRPRRQGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28320; Mature: 28320
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQWRRNHWPAAGRSAVVSEPGLTMDVLELFPRHILEGDLEPALLTPLQRHAKAVLQQPE CCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC RSPDASAKLAGQLTQQRELSLQEPAVAELCSSVLLPGCERWIRHVIDKQPPQGRGPWTPG CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCC RYQLRMVDVWLNSQQAGDYNPTHTHGGSFSGVIFLQVPPQINGESFDGQLCFHGPEEWHI CEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCHHHH QSFRTGMAHYVLPKPGRFYIFPAWQPHSVMPFRGDGARWSLAFNVMAIPQPAGNTTARNL HHHHCCCEEEECCCCCCEEEEECCCCCCCCEECCCCCEEEEEEEEEEECCCCCCCCEEEE SLSSNRPRRQGF ECCCCCCCCCCC >Mature Secondary Structure MDQWRRNHWPAAGRSAVVSEPGLTMDVLELFPRHILEGDLEPALLTPLQRHAKAVLQQPE CCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC RSPDASAKLAGQLTQQRELSLQEPAVAELCSSVLLPGCERWIRHVIDKQPPQGRGPWTPG CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCC RYQLRMVDVWLNSQQAGDYNPTHTHGGSFSGVIFLQVPPQINGESFDGQLCFHGPEEWHI CEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCHHHH QSFRTGMAHYVLPKPGRFYIFPAWQPHSVMPFRGDGARWSLAFNVMAIPQPAGNTTARNL HHHHCCCEEEECCCCCCEEEEECCCCCCCCEECCCCCEEEEEEEEEEECCCCCCCCEEEE SLSSNRPRRQGF ECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA