Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242625

Identifier: 148242625

GI number: 148242625

Start: 1351267

End: 1352025

Strand: Direct

Name: 148242625

Synonym: SynRCC307_1526

Alternate gene names: NA

Gene position: 1351267-1352025 (Clockwise)

Preceding gene: 148242624

Following gene: 148242626

Centisome position: 60.73

GC content: 61.26

Gene sequence:

>759_bases
GTGGATCAGTGGCGAAGGAATCACTGGCCAGCTGCTGGGCGTTCTGCAGTGGTATCTGAACCTGGGCTGACCATGGACGT
TCTCGAGCTGTTCCCTCGGCACATCCTGGAAGGGGATCTAGAGCCGGCCCTGCTGACCCCCCTGCAGCGCCATGCCAAGG
CCGTGCTGCAGCAACCGGAACGCAGCCCCGATGCCTCGGCAAAGTTGGCAGGGCAGCTCACCCAGCAACGGGAGCTCTCC
CTGCAGGAGCCAGCCGTCGCCGAGCTGTGCAGCAGCGTTCTTTTGCCCGGTTGTGAACGCTGGATCCGCCATGTGATCGA
CAAACAGCCCCCCCAAGGGCGCGGGCCATGGACACCGGGTCGTTATCAGTTGCGGATGGTGGATGTTTGGCTCAACAGCC
AGCAAGCCGGTGATTACAACCCCACCCACACCCACGGCGGCAGCTTTTCAGGGGTGATTTTTCTGCAGGTGCCACCGCAG
ATCAACGGCGAGAGCTTCGATGGCCAACTCTGTTTTCATGGCCCAGAGGAGTGGCACATTCAGAGCTTCCGCACGGGAAT
GGCCCACTACGTGTTGCCCAAACCGGGCCGCTTTTACATCTTTCCGGCATGGCAACCGCACTCGGTCATGCCCTTTCGGG
GCGATGGGGCGCGGTGGTCTTTGGCCTTCAATGTGATGGCCATTCCTCAGCCGGCAGGCAACACAACAGCACGCAATCTC
TCGCTATCCAGCAATCGCCCACGCCGGCAAGGATTTTGA

Upstream 100 bases:

>100_bases
TCACCACAGCCAAACCTTGGAACAAGCAGGCCTTGGTGGTGGTGGAACGTCTCAATGGTCGCGTGGCCATGGTGGGATTC
AGCGCCGCTGTGGTGGGGGA

Downstream 100 bases:

>100_bases
AATCCAAACAAAGTCAACCAATTGGTGTTTTAAAACACCCTTTTTTGGTTGTTAGACATTAAAAATTAAAAACCCCATCA
CCCAACCATGAGCCAGTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MDQWRRNHWPAAGRSAVVSEPGLTMDVLELFPRHILEGDLEPALLTPLQRHAKAVLQQPERSPDASAKLAGQLTQQRELS
LQEPAVAELCSSVLLPGCERWIRHVIDKQPPQGRGPWTPGRYQLRMVDVWLNSQQAGDYNPTHTHGGSFSGVIFLQVPPQ
INGESFDGQLCFHGPEEWHIQSFRTGMAHYVLPKPGRFYIFPAWQPHSVMPFRGDGARWSLAFNVMAIPQPAGNTTARNL
SLSSNRPRRQGF

Sequences:

>Translated_252_residues
MDQWRRNHWPAAGRSAVVSEPGLTMDVLELFPRHILEGDLEPALLTPLQRHAKAVLQQPERSPDASAKLAGQLTQQRELS
LQEPAVAELCSSVLLPGCERWIRHVIDKQPPQGRGPWTPGRYQLRMVDVWLNSQQAGDYNPTHTHGGSFSGVIFLQVPPQ
INGESFDGQLCFHGPEEWHIQSFRTGMAHYVLPKPGRFYIFPAWQPHSVMPFRGDGARWSLAFNVMAIPQPAGNTTARNL
SLSSNRPRRQGF
>Mature_252_residues
MDQWRRNHWPAAGRSAVVSEPGLTMDVLELFPRHILEGDLEPALLTPLQRHAKAVLQQPERSPDASAKLAGQLTQQRELS
LQEPAVAELCSSVLLPGCERWIRHVIDKQPPQGRGPWTPGRYQLRMVDVWLNSQQAGDYNPTHTHGGSFSGVIFLQVPPQ
INGESFDGQLCFHGPEEWHIQSFRTGMAHYVLPKPGRFYIFPAWQPHSVMPFRGDGARWSLAFNVMAIPQPAGNTTARNL
SLSSNRPRRQGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28320; Mature: 28320

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQWRRNHWPAAGRSAVVSEPGLTMDVLELFPRHILEGDLEPALLTPLQRHAKAVLQQPE
CCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
RSPDASAKLAGQLTQQRELSLQEPAVAELCSSVLLPGCERWIRHVIDKQPPQGRGPWTPG
CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCC
RYQLRMVDVWLNSQQAGDYNPTHTHGGSFSGVIFLQVPPQINGESFDGQLCFHGPEEWHI
CEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCHHHH
QSFRTGMAHYVLPKPGRFYIFPAWQPHSVMPFRGDGARWSLAFNVMAIPQPAGNTTARNL
HHHHCCCEEEECCCCCCEEEEECCCCCCCCEECCCCCEEEEEEEEEEECCCCCCCCEEEE
SLSSNRPRRQGF
ECCCCCCCCCCC
>Mature Secondary Structure
MDQWRRNHWPAAGRSAVVSEPGLTMDVLELFPRHILEGDLEPALLTPLQRHAKAVLQQPE
CCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
RSPDASAKLAGQLTQQRELSLQEPAVAELCSSVLLPGCERWIRHVIDKQPPQGRGPWTPG
CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCC
RYQLRMVDVWLNSQQAGDYNPTHTHGGSFSGVIFLQVPPQINGESFDGQLCFHGPEEWHI
CEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCHHHH
QSFRTGMAHYVLPKPGRFYIFPAWQPHSVMPFRGDGARWSLAFNVMAIPQPAGNTTARNL
HHHHCCCEEEECCCCCCEEEEECCCCCCCCEECCCCCEEEEEEEEEEECCCCCCCCEEEE
SLSSNRPRRQGF
ECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA