The gene/protein map for NC_008253 is currently unavailable.
Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

Click here to switch to the map view.

The map label for this gene is 148242548

Identifier: 148242548

GI number: 148242548

Start: 1288258

End: 1288701

Strand: Direct

Name: 148242548

Synonym: SynRCC307_1449

Alternate gene names: NA

Gene position: 1288258-1288701 (Clockwise)

Preceding gene: 148242545

Following gene: 148242549

Centisome position: 57.9

GC content: 54.95

Gene sequence:

>444_bases
ATGGAAGTCCAGTTTCGCGAATTCGACGCTTTCGATTGCTGGTTCTGGTTGCGGTTTCCCAACCCACCTGGGCAGGGCGA
ACGCCAATACATCGAAGAGCTATTTAACAGCTGGTATTACCTGGGGCGGCTGGGCAGCTTCAACGCAGAAAACCTGCAAG
TGCATGAGCAGGGCGCTGATGTGAGCTGGATGGCTTACGACAACGAAAGCGTGAGCGGCAGCTCCAATGCGTTGATGCAC
AACATCGGCGATATGGAATACCAGGACAACTGGGCGCGCATTTGGTGTGATCTCGGCACGAGCGATGGCGTGGGCCTCGA
TGCCCTGATCAATGGGTTGCACAGTATTGATCGCGAGTACGTGGAGATCCTTGAGTTGCGGGTGGGCGGCATCAATGAAG
ACTGGCCAGCAGAAGCTGGCGATGAACGTTTCTTTGAAGAGTGA

Upstream 100 bases:

>100_bases
ACTAAGGATCGCGGCCTCAGCTGCCGCCGGGTGATAAGCAACCTGATCAAGCTCCAGCACCCTTTGGCGTCCTCGCCGCA
CAGAGACCTAGCTTGACGCC

Downstream 100 bases:

>100_bases
GCCGAGGCGCTCGCCATGGCTGAACTGCGCCGGATCCTGATCACACCGCAGCGCTTAGCCGGCTGCGGACAGGATGTGGA
ACTCACCAGCGATGAACGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MEVQFREFDAFDCWFWLRFPNPPGQGERQYIEELFNSWYYLGRLGSFNAENLQVHEQGADVSWMAYDNESVSGSSNALMH
NIGDMEYQDNWARIWCDLGTSDGVGLDALINGLHSIDREYVEILELRVGGINEDWPAEAGDERFFEE

Sequences:

>Translated_147_residues
MEVQFREFDAFDCWFWLRFPNPPGQGERQYIEELFNSWYYLGRLGSFNAENLQVHEQGADVSWMAYDNESVSGSSNALMH
NIGDMEYQDNWARIWCDLGTSDGVGLDALINGLHSIDREYVEILELRVGGINEDWPAEAGDERFFEE
>Mature_147_residues
MEVQFREFDAFDCWFWLRFPNPPGQGERQYIEELFNSWYYLGRLGSFNAENLQVHEQGADVSWMAYDNESVSGSSNALMH
NIGDMEYQDNWARIWCDLGTSDGVGLDALINGLHSIDREYVEILELRVGGINEDWPAEAGDERFFEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17059; Mature: 17059

Theoretical pI: Translated: 3.82; Mature: 3.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVQFREFDAFDCWFWLRFPNPPGQGERQYIEELFNSWYYLGRLGSFNAENLQVHEQGAD
CCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCC
VSWMAYDNESVSGSSNALMHNIGDMEYQDNWARIWCDLGTSDGVGLDALINGLHSIDREY
EEEEEECCCCCCCCCCHHHHCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHH
VEILELRVGGINEDWPAEAGDERFFEE
HHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEVQFREFDAFDCWFWLRFPNPPGQGERQYIEELFNSWYYLGRLGSFNAENLQVHEQGAD
CCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCC
VSWMAYDNESVSGSSNALMHNIGDMEYQDNWARIWCDLGTSDGVGLDALINGLHSIDREY
EEEEEECCCCCCCCCCHHHHCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHH
VEILELRVGGINEDWPAEAGDERFFEE
HHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA