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The map label for this gene is rsmE [H]

Identifier: 148242549

GI number: 148242549

Start: 1288717

End: 1289475

Strand: Direct

Name: rsmE [H]

Synonym: SynRCC307_1450

Alternate gene names: 148242549

Gene position: 1288717-1289475 (Clockwise)

Preceding gene: 148242548

Following gene: 148242552

Centisome position: 57.92

GC content: 62.32

Gene sequence:

>759_bases
ATGGCTGAACTGCGCCGGATCCTGATCACACCGCAGCGCTTAGCCGGCTGCGGACAGGATGTGGAACTCACCAGCGATGA
ACGGCACTACCTCGAGAAGGTGCTGCGGCTGCGGCCTGGCAGCCCCTTTGCCATCGTCGATGGCCAGGGCGGCTTGCATC
AGGCCGAGTTACGCAGCAACGGTTGGGCGCAACAAGGGGCATGCGTGGAGCAACAACCACCCCAGCAACTCGAACTGGTG
TTGTTGATGGGATTGATCCGCCGAGATTTTGAGGTTGTTGTGCGCATGACCTGCGAGCTGGGCCTCGATCAGCTCAGACC
GCTGCAGGCCCAACGCTCGGTTGTGGAATCCAAGGGTCAACGCCCACAGCGTTGGCAAAGCCAGCTGCAGGAAGCCTGTG
AGCAGTGCGAGCGGCTCTGGCTGCCGCAACTGCACCCGGTGTCGAGCGCCATCGATGGCTTAAGCCAGGCCAAGTCAGCC
GGGGAGCTGCGCTGCATTGGCGTGACCCGCGAAGCCGGCGTGCCGCTCTTAGCTGAGGTACTGGAAGCAGCTTCACCGAC
ACAACGTTGGCAGTTGGCCTGCGGCCCGGAAGGCGGCTGGACGGACGATGAGCGCCAAGCAGCTGCCGCTCATGGTTGGC
AGCCCGTGAGCTTGGGACCAAACATCTTGCGAGCATCCACCGCTGCCATCAGCGGCTTAGCCGTGATGCAACACCAAAGG
CAGCGGCTCAGCGCGACAAATTCCCCACCATTTCTTTAA

Upstream 100 bases:

>100_bases
CGTGGAGATCCTTGAGTTGCGGGTGGGCGGCATCAATGAAGACTGGCCAGCAGAAGCTGGCGATGAACGTTTCTTTGAAG
AGTGAGCCGAGGCGCTCGCC

Downstream 100 bases:

>100_bases
AACCAGCCAAGGCAGCGCCGGGGCGGCGGCGGCGGCGGGGCAGGACGTTGGCGGGGTTGAGCAATTCAGCCGCAAAGGTT
TCGGTGCTGCGCACCGGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA m3U1498 methyltransferase [H]

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MAELRRILITPQRLAGCGQDVELTSDERHYLEKVLRLRPGSPFAIVDGQGGLHQAELRSNGWAQQGACVEQQPPQQLELV
LLMGLIRRDFEVVVRMTCELGLDQLRPLQAQRSVVESKGQRPQRWQSQLQEACEQCERLWLPQLHPVSSAIDGLSQAKSA
GELRCIGVTREAGVPLLAEVLEAASPTQRWQLACGPEGGWTDDERQAAAAHGWQPVSLGPNILRASTAAISGLAVMQHQR
QRLSATNSPPFL

Sequences:

>Translated_252_residues
MAELRRILITPQRLAGCGQDVELTSDERHYLEKVLRLRPGSPFAIVDGQGGLHQAELRSNGWAQQGACVEQQPPQQLELV
LLMGLIRRDFEVVVRMTCELGLDQLRPLQAQRSVVESKGQRPQRWQSQLQEACEQCERLWLPQLHPVSSAIDGLSQAKSA
GELRCIGVTREAGVPLLAEVLEAASPTQRWQLACGPEGGWTDDERQAAAAHGWQPVSLGPNILRASTAAISGLAVMQHQR
QRLSATNSPPFL
>Mature_251_residues
AELRRILITPQRLAGCGQDVELTSDERHYLEKVLRLRPGSPFAIVDGQGGLHQAELRSNGWAQQGACVEQQPPQQLELVL
LMGLIRRDFEVVVRMTCELGLDQLRPLQAQRSVVESKGQRPQRWQSQLQEACEQCERLWLPQLHPVSSAIDGLSQAKSAG
ELRCIGVTREAGVPLLAEVLEAASPTQRWQLACGPEGGWTDDERQAAAAHGWQPVSLGPNILRASTAAISGLAVMQHQRQ
RLSATNSPPFL

Specific function: Specifically methylates the uridine in position 1498 of 16S rRNA in the fully assembled 30S ribosomal subunit [H]

COG id: COG1385

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase RsmE family [H]

Homologues:

Organism=Escherichia coli, GI87082186, Length=233, Percent_Identity=25.7510729613734, Blast_Score=76, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001206
- InterPro:   IPR015947
- InterPro:   IPR006700 [H]

Pfam domain/function: PF04452 Methyltrans_RNA [H]

EC number: =2.1.1.193 [H]

Molecular weight: Translated: 27754; Mature: 27623

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELRRILITPQRLAGCGQDVELTSDERHYLEKVLRLRPGSPFAIVDGQGGLHQAELRSN
CCCHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHC
GWAQQGACVEQQPPQQLELVLLMGLIRRDFEVVVRMTCELGLDQLRPLQAQRSVVESKGQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCC
RPQRWQSQLQEACEQCERLWLPQLHPVSSAIDGLSQAKSAGELRCIGVTREAGVPLLAEV
CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEECHHCCCHHHHHH
LEAASPTQRWQLACGPEGGWTDDERQAAAAHGWQPVSLGPNILRASTAAISGLAVMQHQR
HHHCCCCHHEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
QRLSATNSPPFL
HHHHCCCCCCCC
>Mature Secondary Structure 
AELRRILITPQRLAGCGQDVELTSDERHYLEKVLRLRPGSPFAIVDGQGGLHQAELRSN
CCHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHC
GWAQQGACVEQQPPQQLELVLLMGLIRRDFEVVVRMTCELGLDQLRPLQAQRSVVESKGQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCC
RPQRWQSQLQEACEQCERLWLPQLHPVSSAIDGLSQAKSAGELRCIGVTREAGVPLLAEV
CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEECHHCCCHHHHHH
LEAASPTQRWQLACGPEGGWTDDERQAAAAHGWQPVSLGPNILRASTAAISGLAVMQHQR
HHHCCCCHHEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
QRLSATNSPPFL
HHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]