Click here to switch to the map view.

The map label for this gene is 148242545

Identifier: 148242545

GI number: 148242545

Start: 1286005

End: 1286664

Strand: Direct

Name: 148242545

Synonym: SynRCC307_1446

Alternate gene names: NA

Gene position: 1286005-1286664 (Clockwise)

Preceding gene: 148242544

Following gene: 148242548

Centisome position: 57.8

GC content: 59.55

Gene sequence:

>660_bases
ATGGATCTGGCCCTCACTCTGCGATCTGGTCTTGGCTTGAGCTTCTGCGCCCTCAGTGGCGCTCTGGTCATCACCTCCGA
AGGAAGTGCCTCCTACTTGCAATCCTCGATGGCTGCACGGGTTCTGACCGCGCGGCAGGAGCAAGCACGCCCGAGCTATG
TGCTGACCCCTGAGCGCAAAGCTCTGCTCAACACCATTCGTTTTGCCGAAGGCACCTGGAAGAAGGGCTCTGACATGGGC
TACCGGGTGCTCTACGGAGGTTCCACCTTCAGCAGCTTTGCGAAGCATCCAGAAAAAGTGATCGTCAAGCGCTACACCAG
CGCTGCTGCTGGCGCTTATCAGTTCTTACCCGGCACTTGGAAGATGGCCTCCAGCAAGCTGGGGCTTGGAGATTTCGGTC
CCCGCAACCAAGACCAGGCCGCGCTGTTTTTAATTGAGCGCCGCAATGCCCTGGCCATGGCTGATCAAGGCGAGCTCACG
CCGCAACTGCTGGCCAAGCTGGCTCCCGAGTGGGCCTCACTACCCACCCTGCAGGCGAAAAGCTTCTACGGCCAACCGGT
CAAAAAGCACCAAGACCTCAAGGCCTTCTACGAAAAGAGCCTGGAGCAAGAACGCCGCCAAGCCGCTGGCATGGGGCCAA
TCAGCCTGCTGCTGAGCTAG

Upstream 100 bases:

>100_bases
GGCTAGGACGGCCTTCCGTGTTGGCAACCCTTTTCGTCGGACAAAGCGTAAACAACCGTTAATTCGAAACACTGGTGGTC
CGTCGATTAACAGCGACTGC

Downstream 100 bases:

>100_bases
ATCAAGCCGAACGGGGCAGCGCTTCAATCAGCGCTGCCAGGTCCTCGCCGCTGAAGCGATAGACCTCTCCACAGAAGTGA
CAGGTGAGCTCAGCTCCGTT

Product: muramidase

Products: NA

Alternate protein names: Endolysin; Lysozyme; Phage Lysozyme; Bacteriophage Endolysin Protein; Glycoside Hydrolase Family Protein; Endolysin/Phage Lysozyme; Phage Lysin; Glycoside Hydrolase Family; Lysozyme-Like; Bacteriophage Endolysin

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MDLALTLRSGLGLSFCALSGALVITSEGSASYLQSSMAARVLTARQEQARPSYVLTPERKALLNTIRFAEGTWKKGSDMG
YRVLYGGSTFSSFAKHPEKVIVKRYTSAAAGAYQFLPGTWKMASSKLGLGDFGPRNQDQAALFLIERRNALAMADQGELT
PQLLAKLAPEWASLPTLQAKSFYGQPVKKHQDLKAFYEKSLEQERRQAAGMGPISLLLS

Sequences:

>Translated_219_residues
MDLALTLRSGLGLSFCALSGALVITSEGSASYLQSSMAARVLTARQEQARPSYVLTPERKALLNTIRFAEGTWKKGSDMG
YRVLYGGSTFSSFAKHPEKVIVKRYTSAAAGAYQFLPGTWKMASSKLGLGDFGPRNQDQAALFLIERRNALAMADQGELT
PQLLAKLAPEWASLPTLQAKSFYGQPVKKHQDLKAFYEKSLEQERRQAAGMGPISLLLS
>Mature_219_residues
MDLALTLRSGLGLSFCALSGALVITSEGSASYLQSSMAARVLTARQEQARPSYVLTPERKALLNTIRFAEGTWKKGSDMG
YRVLYGGSTFSSFAKHPEKVIVKRYTSAAAGAYQFLPGTWKMASSKLGLGDFGPRNQDQAALFLIERRNALAMADQGELT
PQLLAKLAPEWASLPTLQAKSFYGQPVKKHQDLKAFYEKSLEQERRQAAGMGPISLLLS

Specific function: Unknown

COG id: COG4678

COG function: function code G; Muramidase (phage lambda lysozyme)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23899; Mature: 23899

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLALTLRSGLGLSFCALSGALVITSEGSASYLQSSMAARVLTARQEQARPSYVLTPERK
CCEEEEECCCCCCHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCHHH
ALLNTIRFAEGTWKKGSDMGYRVLYGGSTFSSFAKHPEKVIVKRYTSAAAGAYQFLPGTW
HHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHCHHHHHHHHHHHHHCCHHHHCCCCH
KMASSKLGLGDFGPRNQDQAALFLIERRNALAMADQGELTPQLLAKLAPEWASLPTLQAK
HHHCCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCHHHHHHHCCHHHCCCCCHHH
SFYGQPVKKHQDLKAFYEKSLEQERRQAAGMGPISLLLS
HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC
>Mature Secondary Structure
MDLALTLRSGLGLSFCALSGALVITSEGSASYLQSSMAARVLTARQEQARPSYVLTPERK
CCEEEEECCCCCCHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCHHH
ALLNTIRFAEGTWKKGSDMGYRVLYGGSTFSSFAKHPEKVIVKRYTSAAAGAYQFLPGTW
HHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHCHHHHHHHHHHHHHCCHHHHCCCCH
KMASSKLGLGDFGPRNQDQAALFLIERRNALAMADQGELTPQLLAKLAPEWASLPTLQAK
HHHCCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCHHHHHHHCCHHHCCCCCHHH
SFYGQPVKKHQDLKAFYEKSLEQERRQAAGMGPISLLLS
HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA