Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is yqaB [C]

Identifier: 148242445

GI number: 148242445

Start: 1192208

End: 1192873

Strand: Direct

Name: yqaB [C]

Synonym: SynRCC307_1346

Alternate gene names: 148242445

Gene position: 1192208-1192873 (Clockwise)

Preceding gene: 148242442

Following gene: 148242447

Centisome position: 53.58

GC content: 63.51

Gene sequence:

>666_bases
ATGGAGGCATTCAGTGGCAAAGCCATGCCGGCGGGCTGCCTGTTCGATCTCGATGGGTTGCTACTCGATACCGAGCCGCT
GCATGGACAAGCCTGGGCGGAAGCCGTGGGCCAATTTGGCGGCTCTGCCAGCGCCGAGCTGCTGCTGGGTTTGAGGGGGC
GCAACAAGTTCGACAACGCCTCAGGCCTGATTGAGGCACTGCAGTTGACGGTCTCGGTGGAGCAGCTGCTGGCGGTGCAA
CAACCCTTGGCACGCGCCAAGGTGCGTCAAGCCAGGGCCATGCCGGGCGCCGAACGGTTGGTTCAGCACTTGCAGGCCGC
TGGGATGCCGCTGGCCATCGCCACCAGCAGCGGTCGGGAATCAGTGGAGATCAAGCTGGCCCCACACCCGTGGCTACAAA
GCATTGCCGTGCGGGTGCATGGGGATGATCCCCAGATCCAACAGGGCAAACCAGCACCAGATCTGTTCATCGAGGCGGCC
CGCCGCCTCAATGTGGACCCCACGCTGTGCTGGGCCTTTGAGGATTCACAAGCGGGTGCGATAGCCGCACTTGCCGCTGG
CTGCCGGGTGTTTGTGGTTCCCGCTGAAGGGCTCAACCGAAGCGACTACCCCTCAGCGGTGGACTGGCTGGGCAGCTTGA
ACAAGACCCCGCTCGATCAGCTTTAG

Upstream 100 bases:

>100_bases
CAGATTCGATCTGAGGGTCCGCCATCAACGGGGCCGTGCATACCAAAGGAATTAAACCCACTCCACTGCCCAGACGGGAC
ACGGCTGACACGGTTGTTCA

Downstream 100 bases:

>100_bases
GTCGATCAAACCTGGCGGAACTGCAGGCTCAAAGGGTCGGCCCAATCACCGCTGGCTTGAATGCCGCGTGGATTACCACT
GAGGTGGCGCAGGATGAAGA

Product: phosphatase/phosphohexomutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MEAFSGKAMPAGCLFDLDGLLLDTEPLHGQAWAEAVGQFGGSASAELLLGLRGRNKFDNASGLIEALQLTVSVEQLLAVQ
QPLARAKVRQARAMPGAERLVQHLQAAGMPLAIATSSGRESVEIKLAPHPWLQSIAVRVHGDDPQIQQGKPAPDLFIEAA
RRLNVDPTLCWAFEDSQAGAIAALAAGCRVFVVPAEGLNRSDYPSAVDWLGSLNKTPLDQL

Sequences:

>Translated_221_residues
MEAFSGKAMPAGCLFDLDGLLLDTEPLHGQAWAEAVGQFGGSASAELLLGLRGRNKFDNASGLIEALQLTVSVEQLLAVQ
QPLARAKVRQARAMPGAERLVQHLQAAGMPLAIATSSGRESVEIKLAPHPWLQSIAVRVHGDDPQIQQGKPAPDLFIEAA
RRLNVDPTLCWAFEDSQAGAIAALAAGCRVFVVPAEGLNRSDYPSAVDWLGSLNKTPLDQL
>Mature_221_residues
MEAFSGKAMPAGCLFDLDGLLLDTEPLHGQAWAEAVGQFGGSASAELLLGLRGRNKFDNASGLIEALQLTVSVEQLLAVQ
QPLARAKVRQARAMPGAERLVQHLQAAGMPLAIATSSGRESVEIKLAPHPWLQSIAVRVHGDDPQIQQGKPAPDLFIEAA
RRLNVDPTLCWAFEDSQAGAIAALAAGCRVFVVPAEGLNRSDYPSAVDWLGSLNKTPLDQL

Specific function: Unknown

COG id: COG0637

COG function: function code R; Predicted phosphatase/phosphohexomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Homo sapiens, GI197382691, Length=204, Percent_Identity=38.7254901960784, Blast_Score=135, Evalue=2e-32,
Organism=Homo sapiens, GI207113149, Length=227, Percent_Identity=34.8017621145374, Blast_Score=122, Evalue=3e-28,
Organism=Homo sapiens, GI296011028, Length=181, Percent_Identity=37.0165745856354, Blast_Score=111, Evalue=5e-25,
Organism=Homo sapiens, GI296011030, Length=203, Percent_Identity=33.9901477832512, Blast_Score=100, Evalue=2e-21,
Organism=Escherichia coli, GI1789046, Length=183, Percent_Identity=34.9726775956284, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI87082080, Length=184, Percent_Identity=31.5217391304348, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1788021, Length=189, Percent_Identity=32.2751322751323, Blast_Score=65, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17554716, Length=204, Percent_Identity=33.3333333333333, Blast_Score=104, Evalue=3e-23,
Organism=Drosophila melanogaster, GI17137324, Length=205, Percent_Identity=39.0243902439024, Blast_Score=122, Evalue=1e-28,
Organism=Drosophila melanogaster, GI45550911, Length=186, Percent_Identity=35.4838709677419, Blast_Score=119, Evalue=2e-27,
Organism=Drosophila melanogaster, GI116008157, Length=205, Percent_Identity=36.0975609756098, Blast_Score=116, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24580849, Length=174, Percent_Identity=33.3333333333333, Blast_Score=98, Evalue=4e-21,
Organism=Drosophila melanogaster, GI20129151, Length=208, Percent_Identity=26.9230769230769, Blast_Score=83, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010976
- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006402
- InterPro:   IPR005833 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 23478; Mature: 23478

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAFSGKAMPAGCLFDLDGLLLDTEPLHGQAWAEAVGQFGGSASAELLLGLRGRNKFDNA
CCCCCCCCCCCCCEEECCCEEECCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCH
SGLIEALQLTVSVEQLLAVQQPLARAKVRQARAMPGAERLVQHLQAAGMPLAIATSSGRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCC
SVEIKLAPHPWLQSIAVRVHGDDPQIQQGKPAPDLFIEAARRLNVDPTLCWAFEDSQAGA
EEEEEECCCHHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCH
IAALAAGCRVFVVPAEGLNRSDYPSAVDWLGSLNKTPLDQL
HHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MEAFSGKAMPAGCLFDLDGLLLDTEPLHGQAWAEAVGQFGGSASAELLLGLRGRNKFDNA
CCCCCCCCCCCCCEEECCCEEECCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCH
SGLIEALQLTVSVEQLLAVQQPLARAKVRQARAMPGAERLVQHLQAAGMPLAIATSSGRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCC
SVEIKLAPHPWLQSIAVRVHGDDPQIQQGKPAPDLFIEAARRLNVDPTLCWAFEDSQAGA
EEEEEECCCHHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCH
IAALAAGCRVFVVPAEGLNRSDYPSAVDWLGSLNKTPLDQL
HHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]