Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is bcp [H]

Identifier: 148242441

GI number: 148242441

Start: 1187911

End: 1188366

Strand: Direct

Name: bcp [H]

Synonym: SynRCC307_1342

Alternate gene names: 148242441

Gene position: 1187911-1188366 (Clockwise)

Preceding gene: 148242438

Following gene: 148242442

Centisome position: 53.39

GC content: 58.99

Gene sequence:

>456_bases
ATGCCCATCGCTGTTGGCGATCAAGCTCCTCCGTTCAAAGCCAAAGATCAAAACGGAGTGGAGCGCTGCCTCGCCGACTT
GGGCGGCAAACCTCTGGTGCTGTTTTTCTATCCAAAGGACGACACGCCCGGCTGCACCATCGAGGCCTGCGGTTTCCGGG
ATCAATTCGCCGCCCTGCAAGCGCTTGGCGCTGAAGTTTGGGGCGTCAGTGGTGATGGGGCCGGCAGTCACCGCCGCTTT
GTGAGCAAGTTCCAGCTTCCTTACCCGTTGCTAGTGGATGAGGGCAATGCGCTGCGCGACGCCTTTGGCGTTGCCAAAAC
CCTGTTTGTCATCCCAGGTCGCGTCACGTATGTGATCGATGGCGGCGGTGTAGTGCGTCTGGTGTTTGACGAGATGCTTG
ATGCCAACGCCCATGTGCGCCAAGCCATGGCAACCCTGCAACAACTCAAGGGCTAA

Upstream 100 bases:

>100_bases
CAGACATTGCGTACGCCCGGCTGCAGCCCATGGTCCCAGCCACCCATCCGTTGCGCCAGCGAGATGTTTATGGTCGTGCA
GCGGCTTAAGGATCGATTCG

Downstream 100 bases:

>100_bases
TGCCGACCTGGCGCCAGCGCGGTGAGCTGTGGACCGTGGGTCCAACCCAACCGAAGGGGGTGGTGCAGTTTCTTGGCGGC
AGTGGCTTAGGCGCGAGCCC

Product: peroxiredoxin

Products: NA

Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MPIAVGDQAPPFKAKDQNGVERCLADLGGKPLVLFFYPKDDTPGCTIEACGFRDQFAALQALGAEVWGVSGDGAGSHRRF
VSKFQLPYPLLVDEGNALRDAFGVAKTLFVIPGRVTYVIDGGGVVRLVFDEMLDANAHVRQAMATLQQLKG

Sequences:

>Translated_151_residues
MPIAVGDQAPPFKAKDQNGVERCLADLGGKPLVLFFYPKDDTPGCTIEACGFRDQFAALQALGAEVWGVSGDGAGSHRRF
VSKFQLPYPLLVDEGNALRDAFGVAKTLFVIPGRVTYVIDGGGVVRLVFDEMLDANAHVRQAMATLQQLKG
>Mature_150_residues
PIAVGDQAPPFKAKDQNGVERCLADLGGKPLVLFFYPKDDTPGCTIEACGFRDQFAALQALGAEVWGVSGDGAGSHRRFV
SKFQLPYPLLVDEGNALRDAFGVAKTLFVIPGRVTYVIDGGGVVRLVFDEMLDANAHVRQAMATLQQLKG

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI32189392, Length=156, Percent_Identity=34.6153846153846, Blast_Score=70, Evalue=6e-13,
Organism=Escherichia coli, GI1788825, Length=144, Percent_Identity=38.1944444444444, Blast_Score=100, Evalue=4e-23,
Organism=Saccharomyces cerevisiae, GI6322180, Length=107, Percent_Identity=35.5140186915888, Blast_Score=72, Evalue=5e-14,

Paralogues:

None

Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 16197; Mature: 16066

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIAVGDQAPPFKAKDQNGVERCLADLGGKPLVLFFYPKDDTPGCTIEACGFRDQFAALQ
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEECCCHHHHHHHH
ALGAEVWGVSGDGAGSHRRFVSKFQLPYPLLVDEGNALRDAFGVAKTLFVIPGRVTYVID
HHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHEEEECCEEEEEEC
GGGVVRLVFDEMLDANAHVRQAMATLQQLKG
CCCEEEEEHHHHHCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PIAVGDQAPPFKAKDQNGVERCLADLGGKPLVLFFYPKDDTPGCTIEACGFRDQFAALQ
CCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEECCCHHHHHHHH
ALGAEVWGVSGDGAGSHRRFVSKFQLPYPLLVDEGNALRDAFGVAKTLFVIPGRVTYVID
HHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHEEEECCEEEEEEC
GGGVVRLVFDEMLDANAHVRQAMATLQQLKG
CCCEEEEEHHHHHCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]