| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
Click here to switch to the map view.
The map label for this gene is metG [H]
Identifier: 148242327
GI number: 148242327
Start: 1089122
End: 1090654
Strand: Direct
Name: metG [H]
Synonym: SynRCC307_1228
Alternate gene names: 148242327
Gene position: 1089122-1090654 (Clockwise)
Preceding gene: 148242325
Following gene: 148242328
Centisome position: 48.95
GC content: 55.51
Gene sequence:
>1533_bases ATGACAAGCACACTCACCACTCCGCTTTATTACGTCAACGACAAGCCCCACATCGGCAGTGTTTACACCACGTTGGCAGT CGATACTCTGGCCCGTTTTAAGCGACTTAGCGGCGAGAATGTGGTGTTCATCACGGGATGCGATGAACACGGTCAAAAGA TTCAACGAACCGCTGAATCAGCGGGGATTGATCCTCAACAACATTGCGACCAAATCAGCAGCACCTTTGCATCGGTGTGG TCGCAGTGGCAGATCAGCAATGATCGTTTCATACGCACCACAGATCCCCGCCACCAATCGATTGTTGAGCAGTTCTTCGC CCGAGTCGAAGCCAACGGCGACATTATTGAAGGCCGGCAACAAGGCTGGTATTGCGTTGCCTGTGAAGAATACAAAGATG ATCCGAAAGAGGCCCAATCACCCCACTGCCCGATTCACCAGAAACCCTTGGAATGGCGTGATGAGGCCAACCTGTTCTTC CGGCTGAGTCGTTACCAAGACGCCATTGAAAAGCTCATTGCAACCGAGGGCTTCATTCGCCCAGCCAGCCGGCGCAAAGA AGTTGAAAATTTTGTTGCCAACGGCCTTCGAGATTTCTCCATTTCCCGGCGAAACGTGAGCTGGGGTCTGCCGGTCCCTG GTCATGACGGGCACACCTTCTACGTCTGGTTTGACGCCCTGTTGGGCTACATCACAGCCCTTCTAGAGCCTGATCAGCCA GCCACGCTGGATCAAGCCCTCAGTAATGGCTGGCCAGCCCAATTGCACGTGATTGGCAAAGACATCTTGCGCTTCCACGC TGTGTATTGGCCCGCGATGTGTTTATCCGCTGGGATTGATTTGCCAACAGGGGTGTTTGGCCATGGCTTCCTCACCCGGG AAGGTCAAAAAATGGGCAAGTCCATGGGGAATTCCATTGACCCCACCCGTTTGGTTGAGCTCTGCGGCCGCGATGCTGTG CGCTGGTACCTGCTGCGTGACATCCAATTTGGCGACGATGGCGATATCCAGCAGCAGCGCCTCTTGGATCTGGTCAACAA CGATCTAGCCAACACCATCGGCAATCTGGTGAATCGCTCCATTTCGATGGCCCGTAAATGGTTTGAGGGTGTTCCATCAC TGCCTCAAGAGCTCCCCAGCAACCATCCCCTCAAGCAAGCCGCACAAGCCGCGGTGGCTGATGTGGCGAGCCACTACCAA GAGCTCAGGTTCCATGCTGTGGCCGAACAGGCGCTGCAGTTGGCCATTGCCGCCAACGGTTACCTCAGTGATCAAGCTCC TTGGAAGGCCATCAAAGATCCAGCCAACCGCGATCAAGTGGCCGCTGACTTGTATGCGGTGCTGGAAGCCAGCCGCGTGG TGGGTGTTGTGCTGCAACCGCTCTTGCCCGAGTTCAGTGAACGGCTTTTGCAGCAGCTCAATGCACCCTCAGGGGATTGG ATCGAGCTTTTGAATTGGGGGCAGCTCACGCCAGGCCCATTGGATGCACCATCCCCGCTGCTGCAACGCTTGGAGCTGGA GGAGCCAATTTGA
Upstream 100 bases:
>100_bases ACCTATGACCAGAACGGGGACGTGGCCCTGCTGAAAAGCCATCGCTGCACTGAACTGAGATCATCATGCTGACGGGCGCA GCCTCAGTAAGATCGCGTTG
Downstream 100 bases:
>100_bases AGGTCTTTGCTCTAGGCGCGGGAGCGGGGCTGCTCTGTTTGCTGTTGCATGGATGCGTCGGTGTGTCGCAAAGTCCAGAG CCAGCGAAACCGTTTCAGTT
Product: methionyl-tRNA synthetase
Products: NA
Alternate protein names: Methionine--tRNA ligase; MetRS [H]
Number of amino acids: Translated: 510; Mature: 509
Protein sequence:
>510_residues MTSTLTTPLYYVNDKPHIGSVYTTLAVDTLARFKRLSGENVVFITGCDEHGQKIQRTAESAGIDPQQHCDQISSTFASVW SQWQISNDRFIRTTDPRHQSIVEQFFARVEANGDIIEGRQQGWYCVACEEYKDDPKEAQSPHCPIHQKPLEWRDEANLFF RLSRYQDAIEKLIATEGFIRPASRRKEVENFVANGLRDFSISRRNVSWGLPVPGHDGHTFYVWFDALLGYITALLEPDQP ATLDQALSNGWPAQLHVIGKDILRFHAVYWPAMCLSAGIDLPTGVFGHGFLTREGQKMGKSMGNSIDPTRLVELCGRDAV RWYLLRDIQFGDDGDIQQQRLLDLVNNDLANTIGNLVNRSISMARKWFEGVPSLPQELPSNHPLKQAAQAAVADVASHYQ ELRFHAVAEQALQLAIAANGYLSDQAPWKAIKDPANRDQVAADLYAVLEASRVVGVVLQPLLPEFSERLLQQLNAPSGDW IELLNWGQLTPGPLDAPSPLLQRLELEEPI
Sequences:
>Translated_510_residues MTSTLTTPLYYVNDKPHIGSVYTTLAVDTLARFKRLSGENVVFITGCDEHGQKIQRTAESAGIDPQQHCDQISSTFASVW SQWQISNDRFIRTTDPRHQSIVEQFFARVEANGDIIEGRQQGWYCVACEEYKDDPKEAQSPHCPIHQKPLEWRDEANLFF RLSRYQDAIEKLIATEGFIRPASRRKEVENFVANGLRDFSISRRNVSWGLPVPGHDGHTFYVWFDALLGYITALLEPDQP ATLDQALSNGWPAQLHVIGKDILRFHAVYWPAMCLSAGIDLPTGVFGHGFLTREGQKMGKSMGNSIDPTRLVELCGRDAV RWYLLRDIQFGDDGDIQQQRLLDLVNNDLANTIGNLVNRSISMARKWFEGVPSLPQELPSNHPLKQAAQAAVADVASHYQ ELRFHAVAEQALQLAIAANGYLSDQAPWKAIKDPANRDQVAADLYAVLEASRVVGVVLQPLLPEFSERLLQQLNAPSGDW IELLNWGQLTPGPLDAPSPLLQRLELEEPI >Mature_509_residues TSTLTTPLYYVNDKPHIGSVYTTLAVDTLARFKRLSGENVVFITGCDEHGQKIQRTAESAGIDPQQHCDQISSTFASVWS QWQISNDRFIRTTDPRHQSIVEQFFARVEANGDIIEGRQQGWYCVACEEYKDDPKEAQSPHCPIHQKPLEWRDEANLFFR LSRYQDAIEKLIATEGFIRPASRRKEVENFVANGLRDFSISRRNVSWGLPVPGHDGHTFYVWFDALLGYITALLEPDQPA TLDQALSNGWPAQLHVIGKDILRFHAVYWPAMCLSAGIDLPTGVFGHGFLTREGQKMGKSMGNSIDPTRLVELCGRDAVR WYLLRDIQFGDDGDIQQQRLLDLVNNDLANTIGNLVNRSISMARKWFEGVPSLPQELPSNHPLKQAAQAAVADVASHYQE LRFHAVAEQALQLAIAANGYLSDQAPWKAIKDPANRDQVAADLYAVLEASRVVGVVLQPLLPEFSERLLQQLNAPSGDWI ELLNWGQLTPGPLDAPSPLLQRLELEEPI
Specific function: Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation [H]
COG id: COG0143
COG function: function code J; Methionyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2A subfamily [H]
Homologues:
Organism=Homo sapiens, GI24308436, Length=505, Percent_Identity=34.6534653465347, Blast_Score=299, Evalue=5e-81, Organism=Homo sapiens, GI14043022, Length=554, Percent_Identity=26.3537906137184, Blast_Score=158, Evalue=1e-38, Organism=Escherichia coli, GI1788432, Length=513, Percent_Identity=27.4853801169591, Blast_Score=188, Evalue=8e-49, Organism=Caenorhabditis elegans, GI212645096, Length=521, Percent_Identity=30.3262955854127, Blast_Score=261, Evalue=9e-70, Organism=Caenorhabditis elegans, GI71992781, Length=413, Percent_Identity=27.8450363196126, Blast_Score=174, Evalue=1e-43, Organism=Caenorhabditis elegans, GI17540794, Length=549, Percent_Identity=23.6794171220401, Blast_Score=139, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6321610, Length=523, Percent_Identity=31.1663479923518, Blast_Score=247, Evalue=4e-66, Organism=Saccharomyces cerevisiae, GI6321704, Length=546, Percent_Identity=23.992673992674, Blast_Score=140, Evalue=6e-34, Organism=Drosophila melanogaster, GI21358483, Length=524, Percent_Identity=33.3969465648855, Blast_Score=305, Evalue=4e-83, Organism=Drosophila melanogaster, GI24655311, Length=542, Percent_Identity=23.8007380073801, Blast_Score=143, Evalue=4e-34,
Paralogues:
None
Copy number: 871 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015413 - InterPro: IPR014758 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 [H]
Pfam domain/function: PF08264 Anticodon_1; PF09334 tRNA-synt_1g [H]
EC number: =6.1.1.10 [H]
Molecular weight: Translated: 57241; Mature: 57110
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTLTTPLYYVNDKPHIGSVYTTLAVDTLARFKRLSGENVVFITGCDEHGQKIQRTAES CCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHH AGIDPQQHCDQISSTFASVWSQWQISNDRFIRTTDPRHQSIVEQFFARVEANGDIIEGRQ CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCEECCCC QGWYCVACEEYKDDPKEAQSPHCPIHQKPLEWRDEANLFFRLSRYQDAIEKLIATEGFIR CCEEEEEEHHHCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC PASRRKEVENFVANGLRDFSISRRNVSWGLPVPGHDGHTFYVWFDALLGYITALLEPDQP CHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCC ATLDQALSNGWPAQLHVIGKDILRFHAVYWPAMCLSAGIDLPTGVFGHGFLTREGQKMGK HHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH SMGNSIDPTRLVELCGRDAVRWYLLRDIQFGDDGDIQQQRLLDLVNNDLANTIGNLVNRS HHCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ISMARKWFEGVPSLPQELPSNHPLKQAAQAAVADVASHYQELRFHAVAEQALQLAIAANG HHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC YLSDQAPWKAIKDPANRDQVAADLYAVLEASRVVGVVLQPLLPEFSERLLQQLNAPSGDW CCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH IELLNWGQLTPGPLDAPSPLLQRLELEEPI HHHHHCCCCCCCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure TSTLTTPLYYVNDKPHIGSVYTTLAVDTLARFKRLSGENVVFITGCDEHGQKIQRTAES CCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHH AGIDPQQHCDQISSTFASVWSQWQISNDRFIRTTDPRHQSIVEQFFARVEANGDIIEGRQ CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCEECCCC QGWYCVACEEYKDDPKEAQSPHCPIHQKPLEWRDEANLFFRLSRYQDAIEKLIATEGFIR CCEEEEEEHHHCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC PASRRKEVENFVANGLRDFSISRRNVSWGLPVPGHDGHTFYVWFDALLGYITALLEPDQP CHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCC ATLDQALSNGWPAQLHVIGKDILRFHAVYWPAMCLSAGIDLPTGVFGHGFLTREGQKMGK HHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH SMGNSIDPTRLVELCGRDAVRWYLLRDIQFGDDGDIQQQRLLDLVNNDLANTIGNLVNRS HHCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ISMARKWFEGVPSLPQELPSNHPLKQAAQAAVADVASHYQELRFHAVAEQALQLAIAANG HHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC YLSDQAPWKAIKDPANRDQVAADLYAVLEASRVVGVVLQPLLPEFSERLLQQLNAPSGDW CCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH IELLNWGQLTPGPLDAPSPLLQRLELEEPI HHHHHCCCCCCCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]