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The map label for this gene is gpsA

Identifier: 148242313

GI number: 148242313

Start: 1073379

End: 1074284

Strand: Direct

Name: gpsA

Synonym: SynRCC307_1214

Alternate gene names: 148242313

Gene position: 1073379-1074284 (Clockwise)

Preceding gene: 148242311

Following gene: 148242314

Centisome position: 48.24

GC content: 62.69

Gene sequence:

>906_bases
GTGGCCCTGACGATTGGTGTGCTTGGAGGAGGTGCTTGGGGAAGCACCTTGGCCGGACTGCTGAGCCAGGGCGGCCATCG
CGTTCAGATTTGGCGGCGTGAGCACGGCCCACAAGCTCTGCAAGCTCTTGCAGCCTCTGAGGTTTTGGTGGGAGCCACCG
CCCTGGTCGGTGTCAGTGGCATGGCGCAACAGATCAAGGGCTGGTCAGCCAGACCGATCGTGAGTTGCTCCAAGGGCCTG
GACCCAAGCAGCGGTCAAACAGCGAGTGCCCTGTGGAAGGCGGCTTGCCCCCTGTGGCCTGTTGTGGTGCTTAGTGGCCC
CAATTTGGCCAGTGAGCTGCAACAGGGACTGCCAGCGGCCAGCGTGCTGGCTGGCCATGACGAGGGGTTGCTCAGCACAC
TGCAGCAGCAGCTCAGCACAGAGCAATTTCGCCTGTATCGCAACAACGACCCACTTGGGACTGAATTGGCCGGTGCTCTG
AAAAATGTGATGGCGGTGGCTGCTGGCATCTGTGATGGCCTCCAGCTGGGCGCCAATGCCCGCGCATCGTTGTTGACCCG
TGCCCTGGCCGAAATGGCCACGGTGCTCCACGGCCTGGGAGGCCGTCAGGACACCTTGTACGGCCTAGCTGGCATTGGTG
ATCTCCTGGCGACCGCGACGAGCCCGCTGAGCCGCAATTACCGGTTCGGACTCTGTATGGCCGATGGCTTGGACCGGCAG
CAGGCCCTTGAAAAGGTCGGAGCCACCGTTGAGGGGGTTCCCACCTGTGAAGCCATTGCTTCGCTGGGGCGGCAAAAGCA
ATGGTCCCTGCCAATCACCGAGAGCGTGGCATTGCTGCTTCAGGGCGCGCTCTCTCCCGCACAAGCTCTTCAGCAACTGA
TGCAGCGCGAGCTGCGCTGCGAATGA

Upstream 100 bases:

>100_bases
ACAACCAAAGCCGAACCATCAAGCTCCTGCAGGCGGGCTGGAACGGGCATGGGAACTCCGATGCGCTGTCGCATGATGGC
CATCACATCGTCCTGAGTGC

Downstream 100 bases:

>100_bases
CATTGCCCGTGGTTGCTGTTGATGCGTTCAGCGCCGAGCCCCTTGGCGGGAATGGCGCGACGGTGGTGTGGCTTGAGCAA
CCAGCCGATCGGCAGTGGAT

Product: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase

Products: NA

Alternate protein names: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MALTIGVLGGGAWGSTLAGLLSQGGHRVQIWRREHGPQALQALAASEVLVGATALVGVSGMAQQIKGWSARPIVSCSKGL
DPSSGQTASALWKAACPLWPVVVLSGPNLASELQQGLPAASVLAGHDEGLLSTLQQQLSTEQFRLYRNNDPLGTELAGAL
KNVMAVAAGICDGLQLGANARASLLTRALAEMATVLHGLGGRQDTLYGLAGIGDLLATATSPLSRNYRFGLCMADGLDRQ
QALEKVGATVEGVPTCEAIASLGRQKQWSLPITESVALLLQGALSPAQALQQLMQRELRCE

Sequences:

>Translated_301_residues
MALTIGVLGGGAWGSTLAGLLSQGGHRVQIWRREHGPQALQALAASEVLVGATALVGVSGMAQQIKGWSARPIVSCSKGL
DPSSGQTASALWKAACPLWPVVVLSGPNLASELQQGLPAASVLAGHDEGLLSTLQQQLSTEQFRLYRNNDPLGTELAGAL
KNVMAVAAGICDGLQLGANARASLLTRALAEMATVLHGLGGRQDTLYGLAGIGDLLATATSPLSRNYRFGLCMADGLDRQ
QALEKVGATVEGVPTCEAIASLGRQKQWSLPITESVALLLQGALSPAQALQQLMQRELRCE
>Mature_300_residues
ALTIGVLGGGAWGSTLAGLLSQGGHRVQIWRREHGPQALQALAASEVLVGATALVGVSGMAQQIKGWSARPIVSCSKGLD
PSSGQTASALWKAACPLWPVVVLSGPNLASELQQGLPAASVLAGHDEGLLSTLQQQLSTEQFRLYRNNDPLGTELAGALK
NVMAVAAGICDGLQLGANARASLLTRALAEMATVLHGLGGRQDTLYGLAGIGDLLATATSPLSRNYRFGLCMADGLDRQQ
ALEKVGATVEGVPTCEAIASLGRQKQWSLPITESVALLLQGALSPAQALQQLMQRELRCE

Specific function: De novo phospholipid biosynthesis; glycerol-3 phosphate formation. [C]

COG id: COG0240

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm (Probable)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family

Homologues:

Organism=Homo sapiens, GI33695088, Length=231, Percent_Identity=25.5411255411255, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI1790037, Length=332, Percent_Identity=34.3373493975904, Blast_Score=164, Evalue=5e-42,
Organism=Drosophila melanogaster, GI17136204, Length=268, Percent_Identity=24.6268656716418, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI17136200, Length=268, Percent_Identity=24.6268656716418, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI17136202, Length=268, Percent_Identity=24.6268656716418, Blast_Score=72, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GPDA_SYNR3 (A5GTA8)

Other databases:

- EMBL:   CT978603
- RefSeq:   YP_001227470.1
- ProteinModelPortal:   A5GTA8
- SMR:   A5GTA8
- STRING:   A5GTA8
- GeneID:   5157125
- GenomeReviews:   CT978603_GR
- KEGG:   syr:SynRCC307_1214
- eggNOG:   COG0240
- HOGENOM:   HBG586392
- OMA:   INEMAEL
- ProtClustDB:   PRK14619
- HAMAP:   MF_00394
- InterPro:   IPR008927
- InterPro:   IPR013328
- InterPro:   IPR006168
- InterPro:   IPR006109
- InterPro:   IPR011128
- InterPro:   IPR016040
- Gene3D:   G3DSA:3.40.50.720
- Gene3D:   G3DSA:1.10.1040.10
- PANTHER:   PTHR11728
- PIRSF:   PIRSF000114
- PRINTS:   PR00077

Pfam domain/function: PF07479 NAD_Gly3P_dh_C; PF01210 NAD_Gly3P_dh_N; SSF48179 6DGDH_C_like

EC number: =1.1.1.94

Molecular weight: Translated: 31216; Mature: 31085

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: PS00957 NAD_G3PDH

Important sites: ACT_SITE 161-161 BINDING 78-78 BINDING 78-78 BINDING 110-110 BINDING 225-225 BINDING 251-251

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTIGVLGGGAWGSTLAGLLSQGGHRVQIWRREHGPQALQALAASEVLVGATALVGVSG
CEEEEEEECCCHHHHHHHHHHHCCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHH
MAQQIKGWSARPIVSCSKGLDPSSGQTASALWKAACPLWPVVVLSGPNLASELQQGLPAA
HHHHHCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHCCHHEEEEECCCCHHHHHHHCCCHH
SVLAGHDEGLLSTLQQQLSTEQFRLYRNNDPLGTELAGALKNVMAVAAGICDGLQLGANA
HHHCCCCHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH
RASLLTRALAEMATVLHGLGGRQDTLYGLAGIGDLLATATSPLSRNYRFGLCMADGLDRQ
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHH
QALEKVGATVEGVPTCEAIASLGRQKQWSLPITESVALLLQGALSPAQALQQLMQRELRC
HHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
E
C
>Mature Secondary Structure 
ALTIGVLGGGAWGSTLAGLLSQGGHRVQIWRREHGPQALQALAASEVLVGATALVGVSG
EEEEEEECCCHHHHHHHHHHHCCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHH
MAQQIKGWSARPIVSCSKGLDPSSGQTASALWKAACPLWPVVVLSGPNLASELQQGLPAA
HHHHHCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHCCHHEEEEECCCCHHHHHHHCCCHH
SVLAGHDEGLLSTLQQQLSTEQFRLYRNNDPLGTELAGALKNVMAVAAGICDGLQLGANA
HHHCCCCHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH
RASLLTRALAEMATVLHGLGGRQDTLYGLAGIGDLLATATSPLSRNYRFGLCMADGLDRQ
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHH
QALEKVGATVEGVPTCEAIASLGRQKQWSLPITESVALLLQGALSPAQALQQLMQRELRC
HHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA