Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242311

Identifier: 148242311

GI number: 148242311

Start: 1072234

End: 1072656

Strand: Direct

Name: 148242311

Synonym: SynRCC307_1212

Alternate gene names: NA

Gene position: 1072234-1072656 (Clockwise)

Preceding gene: 148242309

Following gene: 148242313

Centisome position: 48.19

GC content: 60.05

Gene sequence:

>423_bases
TTGTGGCCTGTGAACTCCAACCCAAATGCTCCAAAACACGTTCTGGGAGGCCCTTTGCAGCGATGTGGCTGCCAACCCAT
GACCGGTTGGTACCGCGATGGCTTTTGCCGAACTGACGCGGCTGATGTGGGTCAACACACGGTGTGTTGCCAGGTGAACG
ACTCGTTCTTGAGCTACAGCAAGGCCCAAGGCAACGACCTCAGCACGCCGATGCCCCAATTTGATTTCCCGGGGCTGAAG
CCTGGGGACCATTGGTGTATTTGTGCGGCTCGCTGGTTGCAGGCCTACGCCGACGGCATGGCTCCGCCGGTGATCCTCGA
GCGATGCGAGCAATCGGCCCTGGAGGTGATCCCTCTGGAGTTGCTCAAGGAGCTCGCCTTACCAGGGGATGACGCTTCCA
TCCCAAGCCAGGAAGCGCCCTGA

Upstream 100 bases:

>100_bases
CAGTTCAGCAGGTGTCGATGGTCGAAACAGACAGCCACAACGTGGCCCCCATGACCCATAGCGCCTACCCCCCCGAATCC
GTCAAGCTTTTGATAGCAGT

Downstream 100 bases:

>100_bases
ATCCTCTGGTGTTTGCCGCGCCAACACATCCAACAGATGTCCCGCTGCCCGTTGGGGACTGAACAACTTTTCAGCCGGCA
CCGCCGAGCGAAACGGTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MWPVNSNPNAPKHVLGGPLQRCGCQPMTGWYRDGFCRTDAADVGQHTVCCQVNDSFLSYSKAQGNDLSTPMPQFDFPGLK
PGDHWCICAARWLQAYADGMAPPVILERCEQSALEVIPLELLKELALPGDDASIPSQEAP

Sequences:

>Translated_140_residues
MWPVNSNPNAPKHVLGGPLQRCGCQPMTGWYRDGFCRTDAADVGQHTVCCQVNDSFLSYSKAQGNDLSTPMPQFDFPGLK
PGDHWCICAARWLQAYADGMAPPVILERCEQSALEVIPLELLKELALPGDDASIPSQEAP
>Mature_140_residues
MWPVNSNPNAPKHVLGGPLQRCGCQPMTGWYRDGFCRTDAADVGQHTVCCQVNDSFLSYSKAQGNDLSTPMPQFDFPGLK
PGDHWCICAARWLQAYADGMAPPVILERCEQSALEVIPLELLKELALPGDDASIPSQEAP

Specific function: Unknown

COG id: COG3651

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15272; Mature: 15272

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
5.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWPVNSNPNAPKHVLGGPLQRCGCQPMTGWYRDGFCRTDAADVGQHTVCCQVNDSFLSYS
CCCCCCCCCCCHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHH
KAQGNDLSTPMPQFDFPGLKPGDHWCICAARWLQAYADGMAPPVILERCEQSALEVIPLE
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LLKELALPGDDASIPSQEAP
HHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MWPVNSNPNAPKHVLGGPLQRCGCQPMTGWYRDGFCRTDAADVGQHTVCCQVNDSFLSYS
CCCCCCCCCCCHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHH
KAQGNDLSTPMPQFDFPGLKPGDHWCICAARWLQAYADGMAPPVILERCEQSALEVIPLE
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LLKELALPGDDASIPSQEAP
HHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA