| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242309
Identifier: 148242309
GI number: 148242309
Start: 1071624
End: 1071896
Strand: Direct
Name: 148242309
Synonym: SynRCC307_1210
Alternate gene names: NA
Gene position: 1071624-1071896 (Clockwise)
Preceding gene: 148242308
Following gene: 148242311
Centisome position: 48.16
GC content: 58.97
Gene sequence:
>273_bases ATGGCGATTGCTGGACCTGGCGGCGTTGATGACGCCATTGCCGCTGGCCTGGACCTCGATGGAACACCGATTCCAGGGCC GATGGTGGACCTCTACCGCGAGGTGATGGAGCTTGAGAGCAAGCGAGCCCGCAGCGGCGTCAAAAAATCAATGCGCAACC GGATCGTCAAAACCGGGGCCAAGCACTTTGATCAAGAGACCTTGAACCAACGCCTCATCGACGCCGGCTGGGATGGTCTG AAGGCCAAGGAGATCGCGTTCTTCTACAGCTGA
Upstream 100 bases:
>100_bases GAGCCAGAACAGAGCACAACCGCCCTGGTGGCCCTGCACAGCCAGGCGCGCTATTTCAGCGCTTGATTGTGAGAGCCTGA GCGCTTGCTGCGCTGAATCA
Downstream 100 bases:
>100_bases GCTGATTTATTCGCTGACGCGCCCTTCCAGGGCGTCGATCACGCTTTGTTGAAACGCATCGAGGGCGGAGGAGTCGCTGA GATCTTCCCCCTCTCCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MAIAGPGGVDDAIAAGLDLDGTPIPGPMVDLYREVMELESKRARSGVKKSMRNRIVKTGAKHFDQETLNQRLIDAGWDGL KAKEIAFFYS
Sequences:
>Translated_90_residues MAIAGPGGVDDAIAAGLDLDGTPIPGPMVDLYREVMELESKRARSGVKKSMRNRIVKTGAKHFDQETLNQRLIDAGWDGL KAKEIAFFYS >Mature_89_residues AIAGPGGVDDAIAAGLDLDGTPIPGPMVDLYREVMELESKRARSGVKKSMRNRIVKTGAKHFDQETLNQRLIDAGWDGLK AKEIAFFYS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9807; Mature: 9676
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIAGPGGVDDAIAAGLDLDGTPIPGPMVDLYREVMELESKRARSGVKKSMRNRIVKTGA CCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KHFDQETLNQRLIDAGWDGLKAKEIAFFYS HHHHHHHHHHHHHHCCCCCCCHHHHHEECC >Mature Secondary Structure AIAGPGGVDDAIAAGLDLDGTPIPGPMVDLYREVMELESKRARSGVKKSMRNRIVKTGA CCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KHFDQETLNQRLIDAGWDGLKAKEIAFFYS HHHHHHHHHHHHHHCCCCCCCHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA