Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242286

Identifier: 148242286

GI number: 148242286

Start: 1045430

End: 1045834

Strand: Direct

Name: 148242286

Synonym: SynRCC307_1187

Alternate gene names: NA

Gene position: 1045430-1045834 (Clockwise)

Preceding gene: 148242284

Following gene: 148242289

Centisome position: 46.99

GC content: 60.49

Gene sequence:

>405_bases
ATGGATTGCAGTTCCCATCAACCCAAACTGGTGGCCACTGGCATCTCTCCGTTGGGGATCGTGTCAGTCGGTGTGGTGCC
GATGGGAATCATTGCGATCGGCGTGGTGCCGATGGGTGTGATCTCTCTGGGAGTGGTGAGCATGGGGGTGATCACCGCTG
GTTTCACCACCATGGGATTGATCTGGGGCGGCATGGCTGGCATGGGCCCGATTCAGGTGGGTGGCCAGAGTCACCAGGCC
GAAGCGCCACTGATGTTTGCAACCCAGCAAGAAGCCGAAGCCCGGGCCCGCGAGATGGGATGTGTGGGTGCCCATCCCCA
TGGACCCGGTGGTCAGCTGTGGATGCCCTGCAGCACCATGCAGCAGTTTTTAGAGGTCCACTCCAGCGGACACCATCAAC
ACTGA

Upstream 100 bases:

>100_bases
CAGCCGAACTCACCAAGGCCGGCGGCCGTGGGTAGTCCGCAACGCGCTCAGCCATGGCCCTGTTGCCTGTGAAACCTCAA
AACCTACCTAGCCTGGATCC

Downstream 100 bases:

>100_bases
GCTCACTCAGGGCACCAGGTTGACGAGCTTGCCCGGCACCACAATCACCCGCTTGGGGGCATTGCCTTCCAGCCATTTTT
GGGCCACATCACTGGCGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MDCSSHQPKLVATGISPLGIVSVGVVPMGIIAIGVVPMGVISLGVVSMGVITAGFTTMGLIWGGMAGMGPIQVGGQSHQA
EAPLMFATQQEAEARAREMGCVGAHPHGPGGQLWMPCSTMQQFLEVHSSGHHQH

Sequences:

>Translated_134_residues
MDCSSHQPKLVATGISPLGIVSVGVVPMGIIAIGVVPMGVISLGVVSMGVITAGFTTMGLIWGGMAGMGPIQVGGQSHQA
EAPLMFATQQEAEARAREMGCVGAHPHGPGGQLWMPCSTMQQFLEVHSSGHHQH
>Mature_134_residues
MDCSSHQPKLVATGISPLGIVSVGVVPMGIIAIGVVPMGVISLGVVSMGVITAGFTTMGLIWGGMAGMGPIQVGGQSHQA
EAPLMFATQQEAEARAREMGCVGAHPHGPGGQLWMPCSTMQQFLEVHSSGHHQH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13751; Mature: 13751

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
8.2 %Met     (Translated Protein)
10.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
8.2 %Met     (Mature Protein)
10.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDCSSHQPKLVATGISPLGIVSVGVVPMGIIAIGVVPMGVISLGVVSMGVITAGFTTMGL
CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IWGGMAGMGPIQVGGQSHQAEAPLMFATQQEAEARAREMGCVGAHPHGPGGQLWMPCSTM
HHHCCCCCCCEEECCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCCCCCCCCEEECHHHH
QQFLEVHSSGHHQH
HHHHHHHCCCCCCC
>Mature Secondary Structure
MDCSSHQPKLVATGISPLGIVSVGVVPMGIIAIGVVPMGVISLGVVSMGVITAGFTTMGL
CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IWGGMAGMGPIQVGGQSHQAEAPLMFATQQEAEARAREMGCVGAHPHGPGGQLWMPCSTM
HHHCCCCCCCEEECCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCCCCCCCCEEECHHHH
QQFLEVHSSGHHQH
HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA