| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242152
Identifier: 148242152
GI number: 148242152
Start: 953740
End: 953907
Strand: Direct
Name: 148242152
Synonym: SynRCC307_1053
Alternate gene names: NA
Gene position: 953740-953907 (Clockwise)
Preceding gene: 148242150
Following gene: 148242153
Centisome position: 42.87
GC content: 57.14
Gene sequence:
>168_bases ATGGCTGAATTGATCCGTTTGAACACATTTCGCCAAGGCATCTCCCGCGCTGTGGAGATCCCGGTGGAAGACCTTGAGCG CACCCGAGAGGAGTTGATTGCTGAGGGTTGCCTGGTGTGGCCAGTGGCCGATCAGACCAGTCGCAGCATGAATCAACAGG CGGCATGA
Upstream 100 bases:
>100_bases GATCGGTGGATCGAAGCGTTGCATGTCAGGGGCCGAAAACAGCTGGGCTTGCCCCGTCGTAGCGGGCCCGGTAAACCCTC TGCAATGCGCCACCCTCGCC
Downstream 100 bases:
>100_bases GCCCAGCCTTGTCAGCATGGGTCCATGGCCCGTGCTGTTGCTGACAACGTTTCAGGACCGTTTTTTGTCAATGAGCGCTG CATTGATTGCGGCACCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 55; Mature: 54
Protein sequence:
>55_residues MAELIRLNTFRQGISRAVEIPVEDLERTREELIAEGCLVWPVADQTSRSMNQQAA
Sequences:
>Translated_55_residues MAELIRLNTFRQGISRAVEIPVEDLERTREELIAEGCLVWPVADQTSRSMNQQAA >Mature_54_residues AELIRLNTFRQGISRAVEIPVEDLERTREELIAEGCLVWPVADQTSRSMNQQAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6243; Mature: 6112
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELIRLNTFRQGISRAVEIPVEDLERTREELIAEGCLVWPVADQTSRSMNQQAA CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEECCCCCHHHHHHHCCCC >Mature Secondary Structure AELIRLNTFRQGISRAVEIPVEDLERTREELIAEGCLVWPVADQTSRSMNQQAA CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEECCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA