| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242153
Identifier: 148242153
GI number: 148242153
Start: 953932
End: 954804
Strand: Direct
Name: 148242153
Synonym: SynRCC307_1054
Alternate gene names: NA
Gene position: 953932-954804 (Clockwise)
Preceding gene: 148242152
Following gene: 148242157
Centisome position: 42.88
GC content: 61.86
Gene sequence:
>873_bases ATGGCCCGTGCTGTTGCTGACAACGTTTCAGGACCGTTTTTTGTCAATGAGCGCTGCATTGATTGCGGCACCTGCTGGAC GTTTGACCCTGAGCACTACGGCGCCGCGGCTGAGACGGCTTGTGTGCATCGTCAACCGAGCGGAGCTGAGGCGCAGCGCC AAGCGCTTCTAGCTCTGCAAGCCTGTCCGGTTGCGGCGATTGAAACCAGCCCTGAGCTGCTGCGGCAAACCCCCGCAGAT GGTTTTCCGGCGTTGATCACCACCGCCGGAGATGCCGAGATCTTTTATTGCGGCTGGGCTTCGCGCAAAAGCTTTGGTGC CCGCAGTTGGTTGGTGAAGCGCCCTGCGGGGAATGTGTTGATCGATGTGCCCCGCTGGAGTGCCCCCTTGGCTCGCCGGC TTCAATCCATGGGGGGCGTGAGCGCGATGGTGTTGACCCACCGCGACGACGTGGCCGATCACCAGCGTTGGGTCCAGGCC TTGGGATGCCCGCGCTGGATTCATCAAGCTGATGGTGATGCGGCACCCGAGGCGGAGCATCAGCTCAACGGCAGCGATGC CGAAACCATTGCTCCTGGCCTGCAGTTGATTCCAACACCGGGGCACACGGCAGGTTCGCTCTGCGCCGTCTTGGGTGAGG CCCGCTGCGTGTTGTTTAGTGGTGATCACCTCTGGTGGAACGCCGAGCAGCAGGTGTTGGTGTGCTCCAAGCACTACTGC TGGTGGAATTTCGAGGAGCAAATCCGCTCGCTCAAAAAGCTGCAGGATCTTGATGTGGCTTGGCTGCTGCCGGGCCATGG CCACCGCCATCGGTTTGCGCCAGGCCAGTGGCAGCAGGCGGTGCAGCAAACCCTGGCCTGGGTTCAACGCTGA
Upstream 100 bases:
>100_bases GTTGATTGCTGAGGGTTGCCTGGTGTGGCCAGTGGCCGATCAGACCAGTCGCAGCATGAATCAACAGGCGGCATGAGCCC AGCCTTGTCAGCATGGGTCC
Downstream 100 bases:
>100_bases CGCCGGCGCCGGTAGTGCCCATGGCGCTGCAACTCCATCAAGTTGGCCCTGGCCACATCAGCGGTGCCGCTATCGGCGAA GCGCTCCAGTAACGGGATTG
Product: metallo-beta-lactamase superfamily hydrolase
Products: NA
Alternate protein names: Beta-Lactamase Domain-Containing Protein; Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase-Like Protein; Cell Surface Glycoprotein; Zn-Dependent Hydrolase
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MARAVADNVSGPFFVNERCIDCGTCWTFDPEHYGAAAETACVHRQPSGAEAQRQALLALQACPVAAIETSPELLRQTPAD GFPALITTAGDAEIFYCGWASRKSFGARSWLVKRPAGNVLIDVPRWSAPLARRLQSMGGVSAMVLTHRDDVADHQRWVQA LGCPRWIHQADGDAAPEAEHQLNGSDAETIAPGLQLIPTPGHTAGSLCAVLGEARCVLFSGDHLWWNAEQQVLVCSKHYC WWNFEEQIRSLKKLQDLDVAWLLPGHGHRHRFAPGQWQQAVQQTLAWVQR
Sequences:
>Translated_290_residues MARAVADNVSGPFFVNERCIDCGTCWTFDPEHYGAAAETACVHRQPSGAEAQRQALLALQACPVAAIETSPELLRQTPAD GFPALITTAGDAEIFYCGWASRKSFGARSWLVKRPAGNVLIDVPRWSAPLARRLQSMGGVSAMVLTHRDDVADHQRWVQA LGCPRWIHQADGDAAPEAEHQLNGSDAETIAPGLQLIPTPGHTAGSLCAVLGEARCVLFSGDHLWWNAEQQVLVCSKHYC WWNFEEQIRSLKKLQDLDVAWLLPGHGHRHRFAPGQWQQAVQQTLAWVQR >Mature_289_residues ARAVADNVSGPFFVNERCIDCGTCWTFDPEHYGAAAETACVHRQPSGAEAQRQALLALQACPVAAIETSPELLRQTPADG FPALITTAGDAEIFYCGWASRKSFGARSWLVKRPAGNVLIDVPRWSAPLARRLQSMGGVSAMVLTHRDDVADHQRWVQAL GCPRWIHQADGDAAPEAEHQLNGSDAETIAPGLQLIPTPGHTAGSLCAVLGEARCVLFSGDHLWWNAEQQVLVCSKHYCW WNFEEQIRSLKKLQDLDVAWLLPGHGHRHRFAPGQWQQAVQQTLAWVQR
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31970; Mature: 31839
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARAVADNVSGPFFVNERCIDCGTCWTFDPEHYGAAAETACVHRQPSGAEAQRQALLALQ CCCCCCCCCCCCEEECCCEECCCCCCCCCHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHH ACPVAAIETSPELLRQTPADGFPALITTAGDAEIFYCGWASRKSFGARSWLVKRPAGNVL HCCCEEECCCHHHHHHCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCEEEECCCCCEE IDVPRWSAPLARRLQSMGGVSAMVLTHRDDVADHQRWVQALGCPRWIHQADGDAAPEAEH EECCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCHHH QLNGSDAETIAPGLQLIPTPGHTAGSLCAVLGEARCVLFSGDHLWWNAEQQVLVCSKHYC HCCCCCHHHHCCCCEEECCCCCCHHHHHHHHCCCEEEEEECCEEEECCCCEEEEEECCCE WWNFEEQIRSLKKLQDLDVAWLLPGHGHRHRFAPGQWQQAVQQTLAWVQR EECHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure ARAVADNVSGPFFVNERCIDCGTCWTFDPEHYGAAAETACVHRQPSGAEAQRQALLALQ CCCCCCCCCCCEEECCCEECCCCCCCCCHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHH ACPVAAIETSPELLRQTPADGFPALITTAGDAEIFYCGWASRKSFGARSWLVKRPAGNVL HCCCEEECCCHHHHHHCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCEEEECCCCCEE IDVPRWSAPLARRLQSMGGVSAMVLTHRDDVADHQRWVQALGCPRWIHQADGDAAPEAEH EECCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCHHH QLNGSDAETIAPGLQLIPTPGHTAGSLCAVLGEARCVLFSGDHLWWNAEQQVLVCSKHYC HCCCCCHHHHCCCCEEECCCCCCHHHHHHHHCCCEEEEEECCEEEECCCCEEEEEECCCE WWNFEEQIRSLKKLQDLDVAWLLPGHGHRHRFAPGQWQQAVQQTLAWVQR EECHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA