| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is dfa3 [H]
Identifier: 148242150
GI number: 148242150
Start: 951748
End: 952230
Strand: Direct
Name: dfa3 [H]
Synonym: SynRCC307_1051
Alternate gene names: 148242150
Gene position: 951748-952230 (Clockwise)
Preceding gene: 148242149
Following gene: 148242152
Centisome position: 42.78
GC content: 63.15
Gene sequence:
>483_bases ATGAGCCTCGACGCTGACGCCAAGAAGGTGCTGCTGCGCAAGATCCCCCACGGCCTGTTCATCTGCGGCGTGGCCGAAGG CGATGTGGTCAATGGCTTTACGGCCAGCTGGGTCACCCAGGGCTCGTTTGAGCCGCCATTGGTGGTGATGGCGGTGCGGG CCGACAGCACCAGCAACGGCATGATCCAGCGCACGGGCAAGTTTTCGCTCAACGTGCTGGCGGCTGATCAAAAAGATCTG GCCGCTGTGTTCTTCAAGCCGCAACAAGGCGTTGGCGGACGCTTTGACGCTGCCCCCTACAAACTCGGCGAACACGGGTT GCCGATCCTGGATGACGGCTTGGGTGGGGTGGAGTGCGCCGTGGTCGGCCAGGTCGCCCATGGCGATCACACCGTGTTTG TCGGTGAGGTCAAGAGCGCTCAGCTGCACCGTGATGCCGCCGCCTTGGAGCTCAGCAGCACTGGCTGGAACTACGGCGGC TAA
Upstream 100 bases:
>100_bases GGTGCGTTTTTTGCGCGGCCGGCGTGAAGCCCTCGATCTGCTTTCGGCTGAAGCCGCTTCAGCTTGAGCTGCCAGGATCA AAGCAGATCGTTCTCCTGCC
Downstream 100 bases:
>100_bases GCCGCTGCATCAAGGCCCATCAAGGCTTCACCACGGGCAAAGATCGCTTGGGCGTAGTCGGTCCAGATGCCCTGGCCCCA ATAGCGAAAGCAGCTGGTCT
Product: flavin reductase-like domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MSLDADAKKVLLRKIPHGLFICGVAEGDVVNGFTASWVTQGSFEPPLVVMAVRADSTSNGMIQRTGKFSLNVLAADQKDL AAVFFKPQQGVGGRFDAAPYKLGEHGLPILDDGLGGVECAVVGQVAHGDHTVFVGEVKSAQLHRDAAALELSSTGWNYGG
Sequences:
>Translated_160_residues MSLDADAKKVLLRKIPHGLFICGVAEGDVVNGFTASWVTQGSFEPPLVVMAVRADSTSNGMIQRTGKFSLNVLAADQKDL AAVFFKPQQGVGGRFDAAPYKLGEHGLPILDDGLGGVECAVVGQVAHGDHTVFVGEVKSAQLHRDAAALELSSTGWNYGG >Mature_159_residues SLDADAKKVLLRKIPHGLFICGVAEGDVVNGFTASWVTQGSFEPPLVVMAVRADSTSNGMIQRTGKFSLNVLAADQKDLA AVFFKPQQGVGGRFDAAPYKLGEHGLPILDDGLGGVECAVVGQVAHGDHTVFVGEVKSAQLHRDAAALELSSTGWNYGG
Specific function: Mediates electron transfer from NADH to oxygen, reducing it to water. This modular protein has 3 redox cofactors, in other organisms the same activity requires 2 or 3 proteins [H]
COG id: COG1853
COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR002563 - InterPro: IPR008254 - InterPro: IPR012349 - InterPro: IPR009002 [H]
Pfam domain/function: PF01613 Flavin_Reduct; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 16765; Mature: 16634
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLDADAKKVLLRKIPHGLFICGVAEGDVVNGFTASWVTQGSFEPPLVVMAVRADSTSNG CCCCHHHHHHHHHHCCCCEEEEEECCCCEECCCEEEEEECCCCCCCEEEEEEECCCCCCC MIQRTGKFSLNVLAADQKDLAAVFFKPQQGVGGRFDAAPYKLGEHGLPILDDGLGGVECA EEEECCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCEEECCCCCEEEE VVGQVAHGDHTVFVGEVKSAQLHRDAAALELSSTGWNYGG EEEEECCCCEEEEEECCCCCHHCCCCEEEEECCCCCCCCC >Mature Secondary Structure SLDADAKKVLLRKIPHGLFICGVAEGDVVNGFTASWVTQGSFEPPLVVMAVRADSTSNG CCCHHHHHHHHHHCCCCEEEEEECCCCEECCCEEEEEECCCCCCCEEEEEEECCCCCCC MIQRTGKFSLNVLAADQKDLAAVFFKPQQGVGGRFDAAPYKLGEHGLPILDDGLGGVECA EEEECCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCEEECCCCCEEEE VVGQVAHGDHTVFVGEVKSAQLHRDAAALELSSTGWNYGG EEEEECCCCEEEEEECCCCCHHCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]