Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242082

Identifier: 148242082

GI number: 148242082

Start: 902757

End: 903242

Strand: Direct

Name: 148242082

Synonym: SynRCC307_0983

Alternate gene names: NA

Gene position: 902757-903242 (Clockwise)

Preceding gene: 148242081

Following gene: 148242083

Centisome position: 40.57

GC content: 60.91

Gene sequence:

>486_bases
ATGAGCGTCTGTCCGGTGCCGGCGGAACAACAACCCCTGCGCCAGTACGAGGAACTGACCGCGTCTTGGTTTTTTCGGTG
GCCTTCCACCAGTTTTGCGGCCTTGAGCCGCCGGCTAGCCCAGGGTTGGTTGCTGCTGCTGCCGATCACCTTGTTGGTGG
CCAGCGGCAGCATTCCGTTGCGCCACGACATGCCGCGGTTGTTTGCCGCTGGTGCCGTTTCCGCCTTGGTGCTGCCTTTG
CTTCTCTTGGTGCGTCAGTGGCTGGGCTGGACCTATGTGCATCGCCGCTTGATGCGAGAGCGCATCACCTATGAGGAATC
GGGTTGGTACGACGGGCAGGAGTGGGAGAAGCCCTTGGAGTGGCGTGAGAAAGATCTGTTGATTGCTCAACATCAGGTGA
GGCCTGTGCTGGGCCGTTTGCTGCGGGCTATCAGTGTTTTGGCTGCGCTACTGCTGTGGGGCGCCAGCCTCTGCCAGGCT
CTTTGA

Upstream 100 bases:

>100_bases
AGAAGAACGCAGTTACTACGATCTGGAGGCTTTCTGGGGACACGGAACAACTGTTCCTTTTGTCTCTGCGGTGGCGTCGA
CTGGATCTTCAACCTGAACC

Downstream 100 bases:

>100_bases
GATCGGCACCGACGCATGACGTCATCGATGGGTCTTAGTGGTTCCAGCCTTGCGGGCCATCCCCCGCTGGAGGTGCGGCT
GCTGCGCGATGGGATGACCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MSVCPVPAEQQPLRQYEELTASWFFRWPSTSFAALSRRLAQGWLLLLPITLLVASGSIPLRHDMPRLFAAGAVSALVLPL
LLLVRQWLGWTYVHRRLMRERITYEESGWYDGQEWEKPLEWREKDLLIAQHQVRPVLGRLLRAISVLAALLLWGASLCQA
L

Sequences:

>Translated_161_residues
MSVCPVPAEQQPLRQYEELTASWFFRWPSTSFAALSRRLAQGWLLLLPITLLVASGSIPLRHDMPRLFAAGAVSALVLPL
LLLVRQWLGWTYVHRRLMRERITYEESGWYDGQEWEKPLEWREKDLLIAQHQVRPVLGRLLRAISVLAALLLWGASLCQA
L
>Mature_160_residues
SVCPVPAEQQPLRQYEELTASWFFRWPSTSFAALSRRLAQGWLLLLPITLLVASGSIPLRHDMPRLFAAGAVSALVLPLL
LLVRQWLGWTYVHRRLMRERITYEESGWYDGQEWEKPLEWREKDLLIAQHQVRPVLGRLLRAISVLAALLLWGASLCQAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18542; Mature: 18411

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVCPVPAEQQPLRQYEELTASWFFRWPSTSFAALSRRLAQGWLLLLPITLLVASGSIPL
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RHDMPRLFAAGAVSALVLPLLLLVRQWLGWTYVHRRLMRERITYEESGWYDGQEWEKPLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
WREKDLLIAQHQVRPVLGRLLRAISVLAALLLWGASLCQAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SVCPVPAEQQPLRQYEELTASWFFRWPSTSFAALSRRLAQGWLLLLPITLLVASGSIPL
CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RHDMPRLFAAGAVSALVLPLLLLVRQWLGWTYVHRRLMRERITYEESGWYDGQEWEKPLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
WREKDLLIAQHQVRPVLGRLLRAISVLAALLLWGASLCQAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA