| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
Click here to switch to the map view.
The map label for this gene is 148242051
Identifier: 148242051
GI number: 148242051
Start: 874213
End: 874458
Strand: Direct
Name: 148242051
Synonym: SynRCC307_0952
Alternate gene names: NA
Gene position: 874213-874458 (Clockwise)
Preceding gene: 148242047
Following gene: 148242053
Centisome position: 39.29
GC content: 61.79
Gene sequence:
>246_bases GTGGTGCCGCTGCCTGATCCGGACCGTTTGCCGACCCAGCGGGTGTTTGACAACCCCGATGGCTTCGCCATGGCTTTCAG CGAAGCCTGGGAGGACTACGAGCGTCAGCATCCAGCCCATGGCCTGGAGCGTGAGGCCAAGCTCAAGCTGGTGTTGGAGA GCTTGGCGGACCATCCCTTTCTGCAGCGCGAGCCCGAACAAGCCCAGCAGTTGGTGCAATTTCGGATGCGTTTGCTGGGC TACTGA
Upstream 100 bases:
>100_bases GCGCTGGTCAGATCCTGCGGGCTCGGCGCCATGGGGCTTCTGCTGAACAGCGCAAAGCACAAGCTTCCCACTCCGTAATC TGCTGAGCAGCGAAGGTGCT
Downstream 100 bases:
>100_bases TCCAAGCCATAGGCAAAGGGGTTGGCCGGATGGCCGATCCCCAGCTCCTGCCGCCATTGCGCGAGTGGCTTGTCCCAGCC GTCTTCCCAGCGCATGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 81; Mature: 81
Protein sequence:
>81_residues MVPLPDPDRLPTQRVFDNPDGFAMAFSEAWEDYERQHPAHGLEREAKLKLVLESLADHPFLQREPEQAQQLVQFRMRLLG Y
Sequences:
>Translated_81_residues MVPLPDPDRLPTQRVFDNPDGFAMAFSEAWEDYERQHPAHGLEREAKLKLVLESLADHPFLQREPEQAQQLVQFRMRLLG Y >Mature_81_residues MVPLPDPDRLPTQRVFDNPDGFAMAFSEAWEDYERQHPAHGLEREAKLKLVLESLADHPFLQREPEQAQQLVQFRMRLLG Y
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9518; Mature: 9518
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPLPDPDRLPTQRVFDNPDGFAMAFSEAWEDYERQHPAHGLEREAKLKLVLESLADHPF CCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCC LQREPEQAQQLVQFRMRLLGY CCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVPLPDPDRLPTQRVFDNPDGFAMAFSEAWEDYERQHPAHGLEREAKLKLVLESLADHPF CCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCC LQREPEQAQQLVQFRMRLLGY CCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA