Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242047

Identifier: 148242047

GI number: 148242047

Start: 870622

End: 871506

Strand: Direct

Name: 148242047

Synonym: SynRCC307_0948

Alternate gene names: NA

Gene position: 870622-871506 (Clockwise)

Preceding gene: 148242046

Following gene: 148242051

Centisome position: 39.13

GC content: 65.54

Gene sequence:

>885_bases
GTGGCTTCCCCTGGCTGCCTTTTTGCTGCAATCTCTCTACAGCTCCACCAAGGCTTGATGCATGCCTTCCCGGTCCGTCC
GGTTGCCGCCGTGCTGCTTGGGGTGGGGCTGGGTGTGGCTGCTGTGGTGGTAGCCGGGCGCGAGCCGCCCATCGCCCCAG
AACCCAAGCGTGGGTGGGCCCAAGGGGCTGGCCTGCAACCGCTGCTGCGCCCCAATCCGCAGGCAGCGCACCGTTGTGCC
GCCAAGTTGGCGATTCGCGAACGGCCAACGCCTGCTGATCCCACGAATTTCGGCGAGCGCCGCCCCACCGACGCTGAAGG
GGGGCTGGTGCCCAACCAGCCATCGGTGATCGTTTTGCATGAAACGGTGATGTCGCTGGGCGACACGCTGCGCTTTTTTC
AGACGCCCCATCCCCGCGATGCTGATCAGGCCAGCTATCACCTGCTGTTGGATCGCCGCGGTATGGCCTACCGCTTGGTC
CCTGATGCCAAGCGGGCCTTTGGTTCGGGGTGGAGTGCTTGGGGGGATGGCTCGATTCGGCACCGCCCCTTGAGCAGCCC
GTTGGCTGGTGGCTCGATCAACAACGTCGCTTTGCATCTCAGCCTTGAGTCGCCTGCTGATGGCCGCGGCGATGACGATG
CCCACAGCGGCTATAGCCGAGCGCAATACGAGCGCCTGGCGGAGCATGTGCTGATCTGGCAGCTGCGCTGGGGCATCCCC
ATGCGCCGCATCACCACCCACGCCGCGGTTGACCGCAGCCATAGCCGCCGTGATCCCCGCAGTTTTCGTTGGGAGCGCTT
TGACCGCGCCTGGCTGCAGGCAGCCTCCAGCTGCGGCATCAGCGCTGAGGGTCCCTACGGCCTTGATGCCATGCCGCAGA
TTTAG

Upstream 100 bases:

>100_bases
AGCTGGTGCTGCGCCGCCGTCAGCAGGTGTTGGCGCCCTTGCTGCTGCTCTGGGGGCTGACCCTGTTAGCGCTTGGCATT
GGCTGGTGGCTGCTGGGGTT

Downstream 100 bases:

>100_bases
TCAACCAATACAGAGAGAGCCGCCAACAGGATCAAGGTGGGTAGGGCCGCCAATTGAGAGGCCGTTATCGGCAGACCGGA
AGCAGCCAGGCCGCTGCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: N-Acetylmuramoyl-L-Alanine Amidase Domain Protein; N-Acetyl-Anhydromuramyl-L-Alanine Amidase

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MASPGCLFAAISLQLHQGLMHAFPVRPVAAVLLGVGLGVAAVVVAGREPPIAPEPKRGWAQGAGLQPLLRPNPQAAHRCA
AKLAIRERPTPADPTNFGERRPTDAEGGLVPNQPSVIVLHETVMSLGDTLRFFQTPHPRDADQASYHLLLDRRGMAYRLV
PDAKRAFGSGWSAWGDGSIRHRPLSSPLAGGSINNVALHLSLESPADGRGDDDAHSGYSRAQYERLAEHVLIWQLRWGIP
MRRITTHAAVDRSHSRRDPRSFRWERFDRAWLQAASSCGISAEGPYGLDAMPQI

Sequences:

>Translated_294_residues
MASPGCLFAAISLQLHQGLMHAFPVRPVAAVLLGVGLGVAAVVVAGREPPIAPEPKRGWAQGAGLQPLLRPNPQAAHRCA
AKLAIRERPTPADPTNFGERRPTDAEGGLVPNQPSVIVLHETVMSLGDTLRFFQTPHPRDADQASYHLLLDRRGMAYRLV
PDAKRAFGSGWSAWGDGSIRHRPLSSPLAGGSINNVALHLSLESPADGRGDDDAHSGYSRAQYERLAEHVLIWQLRWGIP
MRRITTHAAVDRSHSRRDPRSFRWERFDRAWLQAASSCGISAEGPYGLDAMPQI
>Mature_293_residues
ASPGCLFAAISLQLHQGLMHAFPVRPVAAVLLGVGLGVAAVVVAGREPPIAPEPKRGWAQGAGLQPLLRPNPQAAHRCAA
KLAIRERPTPADPTNFGERRPTDAEGGLVPNQPSVIVLHETVMSLGDTLRFFQTPHPRDADQASYHLLLDRRGMAYRLVP
DAKRAFGSGWSAWGDGSIRHRPLSSPLAGGSINNVALHLSLESPADGRGDDDAHSGYSRAQYERLAEHVLIWQLRWGIPM
RRITTHAAVDRSHSRRDPRSFRWERFDRAWLQAASSCGISAEGPYGLDAMPQI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32014; Mature: 31883

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASPGCLFAAISLQLHQGLMHAFPVRPVAAVLLGVGLGVAAVVVAGREPPIAPEPKRGWA
CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHH
QGAGLQPLLRPNPQAAHRCAAKLAIRERPTPADPTNFGERRPTDAEGGLVPNQPSVIVLH
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEH
ETVMSLGDTLRFFQTPHPRDADQASYHLLLDRRGMAYRLVPDAKRAFGSGWSAWGDGSIR
HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEECCHHHHHHCCCCCCCCCCCCC
HRPLSSPLAGGSINNVALHLSLESPADGRGDDDAHSGYSRAQYERLAEHVLIWQLRWGIP
CCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHCCHHHHHHHHHHHHHEEEEHHCCCC
MRRITTHAAVDRSHSRRDPRSFRWERFDRAWLQAASSCGISAEGPYGLDAMPQI
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASPGCLFAAISLQLHQGLMHAFPVRPVAAVLLGVGLGVAAVVVAGREPPIAPEPKRGWA
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHH
QGAGLQPLLRPNPQAAHRCAAKLAIRERPTPADPTNFGERRPTDAEGGLVPNQPSVIVLH
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEH
ETVMSLGDTLRFFQTPHPRDADQASYHLLLDRRGMAYRLVPDAKRAFGSGWSAWGDGSIR
HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEECCHHHHHHCCCCCCCCCCCCC
HRPLSSPLAGGSINNVALHLSLESPADGRGDDDAHSGYSRAQYERLAEHVLIWQLRWGIP
CCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHCCHHHHHHHHHHHHHEEEEHHCCCC
MRRITTHAAVDRSHSRRDPRSFRWERFDRAWLQAASSCGISAEGPYGLDAMPQI
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA