Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242046

Identifier: 148242046

GI number: 148242046

Start: 870092

End: 870679

Strand: Direct

Name: 148242046

Synonym: SynRCC307_0947

Alternate gene names: NA

Gene position: 870092-870679 (Clockwise)

Preceding gene: 148242045

Following gene: 148242047

Centisome position: 39.11

GC content: 66.67

Gene sequence:

>588_bases
ATGACTGCCACCCCCCTGCAGCCACCGCTGCTGCTGTTGCAGCGCAGCTGGCAGCGCTACCGCCAAGCCCCTGTGCTGCT
GGCCGGGTGGGCGTTGGGGTGGATGCTGCTCTGGCAGCTGATGGCCCTGTTGCCTCTGCCGATTTGGCTGCAGTTTGGGG
CCAGCTTGCTGTGCTTCAGCTGGGCCAGCGCTGGACTCATCGACGTGGCGCAGCGGCAATCCCCCATGACCTTGGCCAGC
CTTTGGCTGCCCTTGCGCCGGGCCCCGTGGCCGCTGCTGCTGCTGCCGCTGCTCGTTGGCACGCTGGTGGCCTTGGCTTC
CCTGGCATTTGTGCTGCCGGGCGTGGTGTTGCTGCTGGCTTGGAGCTTGGCCCTGCCGCTGTTGCTGGATCAAGGCGGTG
AAGCCTGGGATGCCATGGCGCGCAGCGGCCAGCTGGTGCTGCGCCGCCGTCAGCAGGTGTTGGCGCCCTTGCTGCTGCTC
TGGGGGCTGACCCTGTTAGCGCTTGGCATTGGCTGGTGGCTGCTGGGGTTGTGGCTTCCCCTGGCTGCCTTTTTGCTGCA
ATCTCTCTACAGCTCCACCAAGGCTTGA

Upstream 100 bases:

>100_bases
AAGGGCGCGTGGTCTACCGGGAGCCTTAAACCCTGGGTTGGTAACAGTTGTGGCTCAAATTGGACTCAGTTTCTACGTTT
GTGTTATTGGGCTGAGTTGA

Downstream 100 bases:

>100_bases
TGCATGCCTTCCCGGTCCGTCCGGTTGCCGCCGTGCTGCTTGGGGTGGGGCTGGGTGTGGCTGCTGTGGTGGTAGCCGGG
CGCGAGCCGCCCATCGCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MTATPLQPPLLLLQRSWQRYRQAPVLLAGWALGWMLLWQLMALLPLPIWLQFGASLLCFSWASAGLIDVAQRQSPMTLAS
LWLPLRRAPWPLLLLPLLVGTLVALASLAFVLPGVVLLLAWSLALPLLLDQGGEAWDAMARSGQLVLRRRQQVLAPLLLL
WGLTLLALGIGWWLLGLWLPLAAFLLQSLYSSTKA

Sequences:

>Translated_195_residues
MTATPLQPPLLLLQRSWQRYRQAPVLLAGWALGWMLLWQLMALLPLPIWLQFGASLLCFSWASAGLIDVAQRQSPMTLAS
LWLPLRRAPWPLLLLPLLVGTLVALASLAFVLPGVVLLLAWSLALPLLLDQGGEAWDAMARSGQLVLRRRQQVLAPLLLL
WGLTLLALGIGWWLLGLWLPLAAFLLQSLYSSTKA
>Mature_194_residues
TATPLQPPLLLLQRSWQRYRQAPVLLAGWALGWMLLWQLMALLPLPIWLQFGASLLCFSWASAGLIDVAQRQSPMTLASL
WLPLRRAPWPLLLLPLLVGTLVALASLAFVLPGVVLLLAWSLALPLLLDQGGEAWDAMARSGQLVLRRRQQVLAPLLLLW
GLTLLALGIGWWLLGLWLPLAAFLLQSLYSSTKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21594; Mature: 21462

Theoretical pI: Translated: 11.92; Mature: 11.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATPLQPPLLLLQRSWQRYRQAPVLLAGWALGWMLLWQLMALLPLPIWLQFGASLLCFS
CCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
WASAGLIDVAQRQSPMTLASLWLPLRRAPWPLLLLPLLVGTLVALASLAFVLPGVVLLLA
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WSLALPLLLDQGGEAWDAMARSGQLVLRRRQQVLAPLLLLWGLTLLALGIGWWLLGLWLP
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAFLLQSLYSSTKA
HHHHHHHHHHHHCCC
>Mature Secondary Structure 
TATPLQPPLLLLQRSWQRYRQAPVLLAGWALGWMLLWQLMALLPLPIWLQFGASLLCFS
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
WASAGLIDVAQRQSPMTLASLWLPLRRAPWPLLLLPLLVGTLVALASLAFVLPGVVLLLA
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WSLALPLLLDQGGEAWDAMARSGQLVLRRRQQVLAPLLLLWGLTLLALGIGWWLLGLWLP
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAFLLQSLYSSTKA
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA