| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241860
Identifier: 148241860
GI number: 148241860
Start: 690024
End: 690575
Strand: Direct
Name: 148241860
Synonym: SynRCC307_0761
Alternate gene names: NA
Gene position: 690024-690575 (Clockwise)
Preceding gene: 148241852
Following gene: 148241862
Centisome position: 31.01
GC content: 60.69
Gene sequence:
>552_bases TTGTTTTCGATCCCAGAACAATCCAACGGCTTGGAGCCGATTGAGCAGCAGATCGAGCGGCTGCCAAACGCAACCCGTCG CCTGGCGGCCCAACTGAGGTTGCCGTTGGAGATTGAGGAGGTTTGGGCGGTGTTGACCGATTACGACCGCCTCACCAGCT TCATTCCCAATCTGATCTCCTCCCGGGTGGTGAGCCGTGAAGGTTTGGAGGTGGTGCTCGAGCAAGAGGGGGCCCAGCGT TTTGCTGGATTGCGCTTCACGGCCAAAGTCACGTTGGAGCTGCGCGAGCGTCGCCCCGATGGCATGCTCGATTTCCGGAT GGTCAGCGGCGACTTCCGCCGTTTTGAGGGCGCTTGGTTCGTCTGCCCTGACCCCCTCGGTGGCGTTCGCCTGCGCTACG AGGTGTTGATTCAGGCCTGCAGGGGGATGCCCATCGGCCTGATCGAGCAGCGCCTCAAAGAAGACTTGTCGATGAACCTG CGTGCTGTGGCCGCTGAAGCCCTTAAGCGCACCAACATGGCTGCCGCACAAGCAGAAGCCGCCATTTACTGA
Upstream 100 bases:
>100_bases CTATAGGAAGCTTCTGCAAGCCTCCTTCACACCGTCAGGGCGAAAACACGTTTAGTGTCACTGATGTTGCAGATGTGACG CTCTGGCGGCCCCAGTCCTT
Downstream 100 bases:
>100_bases ATAACGTCTACTCATCGGTAGACGTTGATCTGGATGTGGTGTGATTGCCAGTGTCTGGATACCCCCAAGGGGATTCGAAC CCCTGTCGCCTCCGTGAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MFSIPEQSNGLEPIEQQIERLPNATRRLAAQLRLPLEIEEVWAVLTDYDRLTSFIPNLISSRVVSREGLEVVLEQEGAQR FAGLRFTAKVTLELRERRPDGMLDFRMVSGDFRRFEGAWFVCPDPLGGVRLRYEVLIQACRGMPIGLIEQRLKEDLSMNL RAVAAEALKRTNMAAAQAEAAIY
Sequences:
>Translated_183_residues MFSIPEQSNGLEPIEQQIERLPNATRRLAAQLRLPLEIEEVWAVLTDYDRLTSFIPNLISSRVVSREGLEVVLEQEGAQR FAGLRFTAKVTLELRERRPDGMLDFRMVSGDFRRFEGAWFVCPDPLGGVRLRYEVLIQACRGMPIGLIEQRLKEDLSMNL RAVAAEALKRTNMAAAQAEAAIY >Mature_183_residues MFSIPEQSNGLEPIEQQIERLPNATRRLAAQLRLPLEIEEVWAVLTDYDRLTSFIPNLISSRVVSREGLEVVLEQEGAQR FAGLRFTAKVTLELRERRPDGMLDFRMVSGDFRRFEGAWFVCPDPLGGVRLRYEVLIQACRGMPIGLIEQRLKEDLSMNL RAVAAEALKRTNMAAAQAEAAIY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20777; Mature: 20777
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSIPEQSNGLEPIEQQIERLPNATRRLAAQLRLPLEIEEVWAVLTDYDRLTSFIPNLIS CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH SRVVSREGLEVVLEQEGAQRFAGLRFTAKVTLELRERRPDGMLDFRMVSGDFRRFEGAWF HHHHHHCCHHHHHHHHHHHHHHCCEEEHEEEHHHHHCCCCCCEEEEECCCHHHHHCCCEE VCPDPLGGVRLRYEVLIQACRGMPIGLIEQRLKEDLSMNLRAVAAEALKRTNMAAAQAEA ECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH AIY CCC >Mature Secondary Structure MFSIPEQSNGLEPIEQQIERLPNATRRLAAQLRLPLEIEEVWAVLTDYDRLTSFIPNLIS CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH SRVVSREGLEVVLEQEGAQRFAGLRFTAKVTLELRERRPDGMLDFRMVSGDFRRFEGAWF HHHHHHCCHHHHHHHHHHHHHHCCEEEHEEEHHHHHCCCCCCEEEEECCCHHHHHCCCEE VCPDPLGGVRLRYEVLIQACRGMPIGLIEQRLKEDLSMNLRAVAAEALKRTNMAAAQAEA ECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH AIY CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA