Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148241763

Identifier: 148241763

GI number: 148241763

Start: 603168

End: 604070

Strand: Direct

Name: 148241763

Synonym: SynRCC307_0664

Alternate gene names: NA

Gene position: 603168-604070 (Clockwise)

Preceding gene: 148241762

Following gene: 148241766

Centisome position: 27.11

GC content: 68.22

Gene sequence:

>903_bases
ATGAGACAGCGGCTGACCCGGCGCCATTGGATGCTGTTGGCGGGCAGTGGCTTGCTGGCAGCCTGCTCCGGCACGAGCCA
GAAGCTGGTGGTGCAACAGGGCCTAGTGCCTTCCGCATGGCTGCGGCGTTTGCCGCGCAGTTGGCGGGCGGAATCCCTCG
ATTGGCGCCAGAGCTTGCCGGCTTGGCCCAGCGGCAGCCGTTGCCTGGCCCTTACCGATGGCTGGGCGATGGCCAACCAG
CCGCTGGCTGCGCAGGCTTGGCCGCAAGAGGCCCTTGATGGGCTGTTGCCTTTGGCCCAACCCCTGCTGCCCTTTGGCCT
GCCCGTGGGGTTTGGCCCTTGGCTGTTGGTGCTGCGCAACCGCCGCGATCTGCTTGCCGGCGGCGGGGCGGAGCGGGGCT
GGTCATTGCTGCTGGATCCCAGCCTGCGTCAGCAAGTGGTGTTGCCCGCCAGCGCGCGCGTGGTGGAAGAGATTGCCAGG
CGCATTGGTGATCCGGCTGAGAGCCTGGCCCGTTTGCGTCAGCAGGCCCTGGGCTTTGGTGATCACGATGCGCTCACCCT
GCTGCTGCATGGCGATGCTCAAGCGGCCGTCTTGCCAAGCCGCGCGGTGATTCCCCAGCTCAGCCGCGACACCCGCTTGC
AGGCGCTGCTGCCAGAGAGTGGTGCTCCGCTGTGGTGGGCTCTGCTGCAACAAACGGCCCAGGGGGAGGCACCGCCGGTG
GAGTGGCTGCTGAACCCGCGCCGTTCACCGCTGCTGGATCAATTGCTGCGCGCTGGATTCACGCCGCCGCTGGACAGGCC
AAGGCTGCAGGCCGCCTTGGCCCGCCAACCCCACGCCGAGCTGCTGCTGCCACCCGCTGAGGTGTTGCAGCGCTGCACCA
GCCTGTTGCCCTTAGCCCCATAG

Upstream 100 bases:

>100_bases
CTGGCGGGCTGGCCTGGTTGACGCAGTTGGCGGGCCTGGACCCGCAGGCCCTCGCTGCCGCCTGTGATCAGGCCTGCGGG
CAGCTGCTTAAGGTCGAGCC

Downstream 100 bases:

>100_bases
CCGGCGCCGCGGGGGTGAGGCCAGGCGCTGGTGGGTGTCAGCCAGCAGCTCGGGGATGGCCAGGTGATGGGGGCAGCGGG
GCAGGCAGTCGCCGCATTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MRQRLTRRHWMLLAGSGLLAACSGTSQKLVVQQGLVPSAWLRRLPRSWRAESLDWRQSLPAWPSGSRCLALTDGWAMANQ
PLAAQAWPQEALDGLLPLAQPLLPFGLPVGFGPWLLVLRNRRDLLAGGGAERGWSLLLDPSLRQQVVLPASARVVEEIAR
RIGDPAESLARLRQQALGFGDHDALTLLLHGDAQAAVLPSRAVIPQLSRDTRLQALLPESGAPLWWALLQQTAQGEAPPV
EWLLNPRRSPLLDQLLRAGFTPPLDRPRLQAALARQPHAELLLPPAEVLQRCTSLLPLAP

Sequences:

>Translated_300_residues
MRQRLTRRHWMLLAGSGLLAACSGTSQKLVVQQGLVPSAWLRRLPRSWRAESLDWRQSLPAWPSGSRCLALTDGWAMANQ
PLAAQAWPQEALDGLLPLAQPLLPFGLPVGFGPWLLVLRNRRDLLAGGGAERGWSLLLDPSLRQQVVLPASARVVEEIAR
RIGDPAESLARLRQQALGFGDHDALTLLLHGDAQAAVLPSRAVIPQLSRDTRLQALLPESGAPLWWALLQQTAQGEAPPV
EWLLNPRRSPLLDQLLRAGFTPPLDRPRLQAALARQPHAELLLPPAEVLQRCTSLLPLAP
>Mature_300_residues
MRQRLTRRHWMLLAGSGLLAACSGTSQKLVVQQGLVPSAWLRRLPRSWRAESLDWRQSLPAWPSGSRCLALTDGWAMANQ
PLAAQAWPQEALDGLLPLAQPLLPFGLPVGFGPWLLVLRNRRDLLAGGGAERGWSLLLDPSLRQQVVLPASARVVEEIAR
RIGDPAESLARLRQQALGFGDHDALTLLLHGDAQAAVLPSRAVIPQLSRDTRLQALLPESGAPLWWALLQQTAQGEAPPV
EWLLNPRRSPLLDQLLRAGFTPPLDRPRLQAALARQPHAELLLPPAEVLQRCTSLLPLAP

Specific function: Unknown

COG id: COG0687

COG function: function code E; Spermidine/putrescine-binding periplasmic protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32902; Mature: 32902

Theoretical pI: Translated: 11.57; Mature: 11.57

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQRLTRRHWMLLAGSGLLAACSGTSQKLVVQQGLVPSAWLRRLPRSWRAESLDWRQSLP
CCCHHHHHHEEEEECCCEEEECCCCCHHHHHHHCCCCHHHHHHCCHHHCCCCCCHHHCCC
AWPSGSRCLALTDGWAMANQPLAAQAWPQEALDGLLPLAQPLLPFGLPVGFGPWLLVLRN
CCCCCCEEEEEECCCHHCCCCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHC
RRDLLAGGGAERGWSLLLDPSLRQQVVLPASARVVEEIARRIGDPAESLARLRQQALGFG
CHHHHCCCCCCCCCEEEECCCCCCEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
DHDALTLLLHGDAQAAVLPSRAVIPQLSRDTRLQALLPESGAPLWWALLQQTAQGEAPPV
CCCEEEEEEECCCCEEECCCHHHCCCCCCCCHHHEECCCCCCHHHHHHHHHHHCCCCCCH
EWLLNPRRSPLLDQLLRAGFTPPLDRPRLQAALARQPHAELLLPPAEVLQRCTSLLPLAP
HHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHEECCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRQRLTRRHWMLLAGSGLLAACSGTSQKLVVQQGLVPSAWLRRLPRSWRAESLDWRQSLP
CCCHHHHHHEEEEECCCEEEECCCCCHHHHHHHCCCCHHHHHHCCHHHCCCCCCHHHCCC
AWPSGSRCLALTDGWAMANQPLAAQAWPQEALDGLLPLAQPLLPFGLPVGFGPWLLVLRN
CCCCCCEEEEEECCCHHCCCCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHC
RRDLLAGGGAERGWSLLLDPSLRQQVVLPASARVVEEIARRIGDPAESLARLRQQALGFG
CHHHHCCCCCCCCCEEEECCCCCCEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
DHDALTLLLHGDAQAAVLPSRAVIPQLSRDTRLQALLPESGAPLWWALLQQTAQGEAPPV
CCCEEEEEEECCCCEEECCCHHHCCCCCCCCHHHEECCCCCCHHHHHHHHHHHCCCCCCH
EWLLNPRRSPLLDQLLRAGFTPPLDRPRLQAALARQPHAELLLPPAEVLQRCTSLLPLAP
HHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHEECCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA