Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148241762

Identifier: 148241762

GI number: 148241762

Start: 602047

End: 603171

Strand: Direct

Name: 148241762

Synonym: SynRCC307_0663

Alternate gene names: NA

Gene position: 602047-603171 (Clockwise)

Preceding gene: 148241761

Following gene: 148241763

Centisome position: 27.06

GC content: 68.36

Gene sequence:

>1125_bases
TTGACCCTTCCTGATCTCTGGCGAGCTCGGGCTCAAGCAGCGCTGCAAAGCAACCAGAGCCAGCTGTTGCTGGTGCTTGC
TGGCACGCAAACCGCAGCTGTGCCTGGGATTTCAGCGGCTGGTGCCACACCCGATAGCCGCCGATTCACCGCTGCTGCCG
ATGCCGAATTGCTGTGGGGCGGCCCCGATGGCCCCAGGCCCCATGCCTTGCCGCCCCTGCCAGCTGGCGTCAGCCCGGCG
TTGATCAGTTGGGTGGCGCAGCAGCAGCTGCGCTTGCCGCTGGTGGTGGCTGATGCCGGAGCCTTCGTGGCCCCAGCGGT
GCCCCATGTGCAGTTGGGGCTGCCGCCAGCGGCTTGCCTCAGTAGCGGGGCTGCCATGGCTCCAGCGGTGGTGGAGCGGT
TGTTGCAGCGCGGCCGCCAGTTGGGCCTTGGCTTTCGCCAGCGCTTCCCTGAGGGATTACTCGTGCTCGCTGAGTGCGTG
CCAGGCGGCACCAGCACCGCTGAAGCCCTGTTGCGCGGCTTGGGTGTCGATGCCGCTGGGTTGGTGAGCGGCAGCTTGCG
GCAGCCGCCCCACAGCCTGCGTGGCGCCTTGGTGCAGCAGGGGCTCGATGCGATGACAGCCCGCGGCATCAGCTCTGAGG
AGCCATTGGAGGTGGTGGCTGCGGTGGGTGATCCCTTTCAAGCCATGGCCTTGGGGGTGTTGCAGGGCCTGTTGCTGCCG
GCTGAGGGCCCAGGGCCCCAGGCTCTGCTCGCCGGCGGCAGCCAGATGCTGGCGCTGGCGGGGCTGTGGATGGCCAGCCT
CAGCGAAGCCGAGCGGGCGGCCTGCCACCAGCAGCTGGCTGTGGTCACCACCTCCTGGGTGATGCAGGAACCAGGGAGCA
ACCTCGAGCTGCTGGCCCAGCGTTTGGCTGCGGTGTGGGGCGTGCAGCCGCCTCTGTTCAGCAGCGCGTTGCGCTTCGAT
GGCTGCCAGCAGCAGGCGCTGCTCGATTACGAATGTGGCTACGTCAAAGAGGGAGTGGGCGCTGGCGGGCTGGCCTGGTT
GACGCAGTTGGCGGGCCTGGACCCGCAGGCCCTCGCTGCCGCCTGTGATCAGGCCTGCGGGCAGCTGCTTAAGGTCGAGC
CATGA

Upstream 100 bases:

>100_bases
GTGTATTTGCTGGCCCTGCATGCCGTGGCCTGGTGGGTGTTGCCGCGCTTGCGTCAGGCGATCCCGGACCCGCCTCGGCT
GCTGCGTCCCCTGCTGGCCC

Downstream 100 bases:

>100_bases
GACAGCGGCTGACCCGGCGCCATTGGATGCTGTTGGCGGGCAGTGGCTTGCTGGCAGCCTGCTCCGGCACGAGCCAGAAG
CTGGTGGTGCAACAGGGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MTLPDLWRARAQAALQSNQSQLLLVLAGTQTAAVPGISAAGATPDSRRFTAAADAELLWGGPDGPRPHALPPLPAGVSPA
LISWVAQQQLRLPLVVADAGAFVAPAVPHVQLGLPPAACLSSGAAMAPAVVERLLQRGRQLGLGFRQRFPEGLLVLAECV
PGGTSTAEALLRGLGVDAAGLVSGSLRQPPHSLRGALVQQGLDAMTARGISSEEPLEVVAAVGDPFQAMALGVLQGLLLP
AEGPGPQALLAGGSQMLALAGLWMASLSEAERAACHQQLAVVTTSWVMQEPGSNLELLAQRLAAVWGVQPPLFSSALRFD
GCQQQALLDYECGYVKEGVGAGGLAWLTQLAGLDPQALAAACDQACGQLLKVEP

Sequences:

>Translated_374_residues
MTLPDLWRARAQAALQSNQSQLLLVLAGTQTAAVPGISAAGATPDSRRFTAAADAELLWGGPDGPRPHALPPLPAGVSPA
LISWVAQQQLRLPLVVADAGAFVAPAVPHVQLGLPPAACLSSGAAMAPAVVERLLQRGRQLGLGFRQRFPEGLLVLAECV
PGGTSTAEALLRGLGVDAAGLVSGSLRQPPHSLRGALVQQGLDAMTARGISSEEPLEVVAAVGDPFQAMALGVLQGLLLP
AEGPGPQALLAGGSQMLALAGLWMASLSEAERAACHQQLAVVTTSWVMQEPGSNLELLAQRLAAVWGVQPPLFSSALRFD
GCQQQALLDYECGYVKEGVGAGGLAWLTQLAGLDPQALAAACDQACGQLLKVEP
>Mature_373_residues
TLPDLWRARAQAALQSNQSQLLLVLAGTQTAAVPGISAAGATPDSRRFTAAADAELLWGGPDGPRPHALPPLPAGVSPAL
ISWVAQQQLRLPLVVADAGAFVAPAVPHVQLGLPPAACLSSGAAMAPAVVERLLQRGRQLGLGFRQRFPEGLLVLAECVP
GGTSTAEALLRGLGVDAAGLVSGSLRQPPHSLRGALVQQGLDAMTARGISSEEPLEVVAAVGDPFQAMALGVLQGLLLPA
EGPGPQALLAGGSQMLALAGLWMASLSEAERAACHQQLAVVTTSWVMQEPGSNLELLAQRLAAVWGVQPPLFSSALRFDG
CQQQALLDYECGYVKEGVGAGGLAWLTQLAGLDPQALAAACDQACGQLLKVEP

Specific function: Unknown

COG id: COG2038

COG function: function code H; NaMN:DMB phosphoribosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0284 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003200
- InterPro:   IPR002805 [H]

Pfam domain/function: PF02277 DBI_PRT [H]

EC number: NA

Molecular weight: Translated: 38343; Mature: 38211

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS00024 HEMOPEXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLPDLWRARAQAALQSNQSQLLLVLAGTQTAAVPGISAAGATPDSRRFTAAADAELLWG
CCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHCCCCCCCCCCCCCCCCEEEECCCEEEEC
GPDGPRPHALPPLPAGVSPALISWVAQQQLRLPLVVADAGAFVAPAVPHVQLGLPPAACL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCHHCCCCCCEEECCCHHHHH
SSGAAMAPAVVERLLQRGRQLGLGFRQRFPEGLLVLAECVPGGTSTAEALLRGLGVDAAG
CCCCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHEEHHHHCCCCCHHHHHHHHHCCCCHHH
LVSGSLRQPPHSLRGALVQQGLDAMTARGISSEEPLEVVAAVGDPFQAMALGVLQGLLLP
HHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCC
AEGPGPQALLAGGSQMLALAGLWMASLSEAERAACHQQLAVVTTSWVMQEPGSNLELLAQ
CCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
RLAAVWGVQPPLFSSALRFDGCQQQALLDYECGYVKEGVGAGGLAWLTQLAGLDPQALAA
HHHHHHCCCCHHHHHHHHCCCCCHHHHHCCCCCHHHCCCCCCHHHHHHHHHCCCHHHHHH
ACDQACGQLLKVEP
HHHHHHHHHHCCCC
>Mature Secondary Structure 
TLPDLWRARAQAALQSNQSQLLLVLAGTQTAAVPGISAAGATPDSRRFTAAADAELLWG
CCHHHHHHHHHHHHHCCCCEEEEEEECCCHHCCCCCCCCCCCCCCCCEEEECCCEEEEC
GPDGPRPHALPPLPAGVSPALISWVAQQQLRLPLVVADAGAFVAPAVPHVQLGLPPAACL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCHHCCCCCCEEECCCHHHHH
SSGAAMAPAVVERLLQRGRQLGLGFRQRFPEGLLVLAECVPGGTSTAEALLRGLGVDAAG
CCCCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHEEHHHHCCCCCHHHHHHHHHCCCCHHH
LVSGSLRQPPHSLRGALVQQGLDAMTARGISSEEPLEVVAAVGDPFQAMALGVLQGLLLP
HHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCC
AEGPGPQALLAGGSQMLALAGLWMASLSEAERAACHQQLAVVTTSWVMQEPGSNLELLAQ
CCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
RLAAVWGVQPPLFSSALRFDGCQQQALLDYECGYVKEGVGAGGLAWLTQLAGLDPQALAA
HHHHHHCCCCHHHHHHHHCCCCCHHHHHCCCCCHHHCCCCCCHHHHHHHHHCCCHHHHHH
ACDQACGQLLKVEP
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12917642 [H]