| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241679
Identifier: 148241679
GI number: 148241679
Start: 514522
End: 514761
Strand: Direct
Name: 148241679
Synonym: SynRCC307_0580
Alternate gene names: NA
Gene position: 514522-514761 (Clockwise)
Preceding gene: 148241678
Following gene: 148241680
Centisome position: 23.13
GC content: 55.0
Gene sequence:
>240_bases ATGGGGTTCAACGGATTGGATCTGTTACCCGGATTGATTGGTTTATTGCTCGTGGCCGTGGTGATCACCTTGGTGGCCTG GGCCTTGAATCTGATGCAATCAGCCAGTGACAGCAATGAGTTTTCGTTGATGCTGGCCGGCTGTTTGGTGTGTTCGGCTG CCGTGGGGCTCTCTACCGTGATGGTGATCAGCCTGACGGGTCCCAACGCGCCGTTGGTTCATATCTTTCATGCCGGCTGA
Upstream 100 bases:
>100_bases GGTGGAGCAGATCAAGGCTGATTTGCAGCGCCGCGGTGTGCCTGTGCGGCCGCTGGTGGACGCTTGAGTTCGTTAAGTTG TCTGTGACATTTCTTACTAA
Downstream 100 bases:
>100_bases AGCCCAGGCAGTACGCCAGCTCTTTGATGAGGTGGCTCCCCACTACGACCGCCTCAACGACCTGTTGAGCCTCGGCCTGC ACAGGCTGTGGAAGCGCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MGFNGLDLLPGLIGLLLVAVVITLVAWALNLMQSASDSNEFSLMLAGCLVCSAAVGLSTVMVISLTGPNAPLVHIFHAG
Sequences:
>Translated_79_residues MGFNGLDLLPGLIGLLLVAVVITLVAWALNLMQSASDSNEFSLMLAGCLVCSAAVGLSTVMVISLTGPNAPLVHIFHAG >Mature_78_residues GFNGLDLLPGLIGLLLVAVVITLVAWALNLMQSASDSNEFSLMLAGCLVCSAAVGLSTVMVISLTGPNAPLVHIFHAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8051; Mature: 7920
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFNGLDLLPGLIGLLLVAVVITLVAWALNLMQSASDSNEFSLMLAGCLVCSAAVGLSTV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHE MVISLTGPNAPLVHIFHAG EEEEECCCCCCEEEEEECC >Mature Secondary Structure GFNGLDLLPGLIGLLLVAVVITLVAWALNLMQSASDSNEFSLMLAGCLVCSAAVGLSTV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHE MVISLTGPNAPLVHIFHAG EEEEECCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA