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The map label for this gene is sepF

Identifier: 148241569

GI number: 148241569

Start: 438945

End: 439496

Strand: Direct

Name: sepF

Synonym: SynRCC307_0470

Alternate gene names: 148241569

Gene position: 438945-439496 (Clockwise)

Preceding gene: 148241568

Following gene: 148241570

Centisome position: 19.73

GC content: 60.51

Gene sequence:

>552_bases
GTGTCCATTTTTTCTCGTCTCAAGAAGGTTGTCGCTGGTGACGACTACCTCGATGACGACTACGGCACTGAGCTGGAGTA
TGAGGACGGCCTAGAGCCCTCCGATTCCACTCTTGATCGCGGCGGGGCAATCGCGCCCATCGGCAGCTTCGACGATGGCG
ATCCCTTCGCGAGCTCCAATGTCATCGGCATGCCCGGCATCACCTCCGCTGCTGCGGAAGTTTTGGTGATGGAACCGCGC
AGCTTTGATGAGATGCCCAAAACCATCCAGGCCCTGCGCGAGCGCAAGACCATCATCTTGAATCTGACGATGATGGAGCC
CGACCAGGCTCAGCGCGCTGTGGACTTCGTTGCTGGTGGCACCTACGCCATCGATGGCCACCAAGAGCGTGTGGGCGAAA
GCATCTTCCTGTTCGCCCCCAGCTGTGTGACGGTCACCACCGCTAGCAGTGAAGAATCCGCTGCCCCCAGCGTGATGGCA
CGCGAAGAAGAAGCAACAGCACCGGCGGCTCCGAGCCCTGCTTGGGGCACGCAGGATGCCATCAACGGCTGA

Upstream 100 bases:

>100_bases
AGTGGGCAGTGCGCTGTTTGGTTCGGATTAAGCGGTGACCAGTTGCAACTGACTGGCGCAGACGCTATTCAAGGACATCA
CCACAAAGGGGCTCACGGCG

Downstream 100 bases:

>100_bases
TTCGCAATTGAGCTTTGGTGTGATTGGCCTGGGCCGCATGGCCCAGGCGCTCCTGACTCCTTGGCTTGAGGCTGGCTTGC
TGCAACGCGAGCAGCTGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MSIFSRLKKVVAGDDYLDDDYGTELEYEDGLEPSDSTLDRGGAIAPIGSFDDGDPFASSNVIGMPGITSAAAEVLVMEPR
SFDEMPKTIQALRERKTIILNLTMMEPDQAQRAVDFVAGGTYAIDGHQERVGESIFLFAPSCVTVTTASSEESAAPSVMA
REEEATAPAAPSPAWGTQDAING

Sequences:

>Translated_183_residues
MSIFSRLKKVVAGDDYLDDDYGTELEYEDGLEPSDSTLDRGGAIAPIGSFDDGDPFASSNVIGMPGITSAAAEVLVMEPR
SFDEMPKTIQALRERKTIILNLTMMEPDQAQRAVDFVAGGTYAIDGHQERVGESIFLFAPSCVTVTTASSEESAAPSVMA
REEEATAPAAPSPAWGTQDAING
>Mature_182_residues
SIFSRLKKVVAGDDYLDDDYGTELEYEDGLEPSDSTLDRGGAIAPIGSFDDGDPFASSNVIGMPGITSAAAEVLVMEPRS
FDEMPKTIQALRERKTIILNLTMMEPDQAQRAVDFVAGGTYAIDGHQERVGESIFLFAPSCVTVTTASSEESAAPSVMAR
EEEATAPAAPSPAWGTQDAING

Specific function: Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of ftsZ protofilaments. Its function overlaps with ftsA

COG id: COG1799

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm. Note=Localizes to the division site, in a ftsZ-dependent manner (By similarity)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sepF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SEPF_SYNR3 (A5GR64)

Other databases:

- EMBL:   CT978603
- RefSeq:   YP_001226726.1
- STRING:   A5GR64
- GeneID:   5158412
- GenomeReviews:   CT978603_GR
- KEGG:   syr:SynRCC307_0470
- eggNOG:   COG1799
- HOGENOM:   HBG732469
- OMA:   FLFAPSC
- ProtClustDB:   CLSK919198
- GO:   GO:0005737
- HAMAP:   MF_01197
- InterPro:   IPR023052
- InterPro:   IPR007561

Pfam domain/function: PF04472 DUF552

EC number: NA

Molecular weight: Translated: 19428; Mature: 19296

Theoretical pI: Translated: 3.85; Mature: 3.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIFSRLKKVVAGDDYLDDDYGTELEYEDGLEPSDSTLDRGGAIAPIGSFDDGDPFASSN
CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VIGMPGITSAAAEVLVMEPRSFDEMPKTIQALRERKTIILNLTMMEPDQAQRAVDFVAGG
EECCCCCHHHHCEEEEECCCCHHHHHHHHHHHHHCCEEEEEEEEECCHHHHHHHHHHCCC
TYAIDGHQERVGESIFLFAPSCVTVTTASSEESAAPSVMAREEEATAPAAPSPAWGTQDA
EEEECCCHHHHCCEEEEEECCEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCC
ING
CCC
>Mature Secondary Structure 
SIFSRLKKVVAGDDYLDDDYGTELEYEDGLEPSDSTLDRGGAIAPIGSFDDGDPFASSN
CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VIGMPGITSAAAEVLVMEPRSFDEMPKTIQALRERKTIILNLTMMEPDQAQRAVDFVAGG
EECCCCCHHHHCEEEEECCCCHHHHHHHHHHHHHCCEEEEEEEEECCHHHHHHHHHHCCC
TYAIDGHQERVGESIFLFAPSCVTVTTASSEESAAPSVMAREEEATAPAAPSPAWGTQDA
EEEECCCHHHHCCEEEEEECCEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCC
ING
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA