| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241492
Identifier: 148241492
GI number: 148241492
Start: 372013
End: 372672
Strand: Direct
Name: 148241492
Synonym: SynRCC307_0393
Alternate gene names: NA
Gene position: 372013-372672 (Clockwise)
Preceding gene: 148241490
Following gene: 148241493
Centisome position: 16.72
GC content: 65.3
Gene sequence:
>660_bases ATGGCTGCAATGCAATCGGGGAGCGAGCCTAAGCAGCCGCAGCTCTGGTGCGGTCTCCTGCCGGGCTGCTCTGACGATCG GTTGGCATCGCTACTCAGCGCCCAAGAGCTGGCCTGGGGGGAAGCGTTACCGCAGCGCCGGCGCCTGATCTTTTGGCAAA CCCGCGCTGTGGTGCGCCAGCAGCTTGCTGCTTGGCTGGGCTGCACTCCAGAGGCTGTGCCGTTGCTGGCACCACCGGCC CACTATCCCCAGCTCGCCGCTGGCTGGGGGTATGTGAGTTGGAGCCACAGCGGCGAGCAGCTGCTCTTGGGTTGGTCGCC TCAGCCTGTGGGGGTGGATCTTGAACCTGCAGATCGCCCGATTCGAGCGGACTCTTTGTGGCGGCGTCTTTGCCCTGGGG AGCCTCCGCCTGCTGCCTTGGCTGATGCGGTGTTGCAGCGCTGGGTGGCGCTGGAGGCATTGACCAAACGCCGCTGCAGC AGCATCGCCGTGGAACTGGGGCGCTGGTCATGGCAATTGGAGCAAGGTCGAGCTGTGCATCGCGGTGATCAGCACAACGT CGATGTTGTGGCCCAGCGCCATCACCTGCAGCAGCGCAGCTGGTGGCTGGGCTGGAGTGGTGGTGCGATGCCCGCTGTAG CGCTTGAGGAAGGCGGCTAA
Upstream 100 bases:
>100_bases GATCACCACCCGCTGACCGCGCAGATCTTTGAGAGCAACGGGTTGGCCGTCCTGATCTGGGAGCGTGAAATCAGGCGCGG GGTCACCGATTTGAAGGGCC
Downstream 100 bases:
>100_bases GGTCCGCCCATGGTTCAACCCCTACGGCTCAGCATGATCGTGCTGCTCACCCTGCTTGGGGTGTGTGGCTTGGTGCGTTT GCCGTTGATGCCACCGTTGT
Product: 4'-phosphopantetheinyl transferase related protein
Products: NA
Alternate protein names: 4-Phosphopantetheinyl Transferase Related Protein; 4-Phosphopantetheinyl Transferase
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MAAMQSGSEPKQPQLWCGLLPGCSDDRLASLLSAQELAWGEALPQRRRLIFWQTRAVVRQQLAAWLGCTPEAVPLLAPPA HYPQLAAGWGYVSWSHSGEQLLLGWSPQPVGVDLEPADRPIRADSLWRRLCPGEPPPAALADAVLQRWVALEALTKRRCS SIAVELGRWSWQLEQGRAVHRGDQHNVDVVAQRHHLQQRSWWLGWSGGAMPAVALEEGG
Sequences:
>Translated_219_residues MAAMQSGSEPKQPQLWCGLLPGCSDDRLASLLSAQELAWGEALPQRRRLIFWQTRAVVRQQLAAWLGCTPEAVPLLAPPA HYPQLAAGWGYVSWSHSGEQLLLGWSPQPVGVDLEPADRPIRADSLWRRLCPGEPPPAALADAVLQRWVALEALTKRRCS SIAVELGRWSWQLEQGRAVHRGDQHNVDVVAQRHHLQQRSWWLGWSGGAMPAVALEEGG >Mature_218_residues AAMQSGSEPKQPQLWCGLLPGCSDDRLASLLSAQELAWGEALPQRRRLIFWQTRAVVRQQLAAWLGCTPEAVPLLAPPAH YPQLAAGWGYVSWSHSGEQLLLGWSPQPVGVDLEPADRPIRADSLWRRLCPGEPPPAALADAVLQRWVALEALTKRRCSS IAVELGRWSWQLEQGRAVHRGDQHNVDVVAQRHHLQQRSWWLGWSGGAMPAVALEEGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24230; Mature: 24099
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAMQSGSEPKQPQLWCGLLPGCSDDRLASLLSAQELAWGEALPQRRRLIFWQTRAVVRQ CCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCHHHHHEEHHHHHHHHHH QLAAWLGCTPEAVPLLAPPAHYPQLAAGWGYVSWSHSGEQLLLGWSPQPVGVDLEPADRP HHHHHHCCCCCCCCCCCCCCCCCCHHCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCC IRADSLWRRLCPGEPPPAALADAVLQRWVALEALTKRRCSSIAVELGRWSWQLEQGRAVH CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHH RGDQHNVDVVAQRHHLQQRSWWLGWSGGAMPAVALEEGG CCCCCCHHHHHHHHHHHHHCEEEEECCCCCCEEEECCCC >Mature Secondary Structure AAMQSGSEPKQPQLWCGLLPGCSDDRLASLLSAQELAWGEALPQRRRLIFWQTRAVVRQ CCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCHHHHHEEHHHHHHHHHH QLAAWLGCTPEAVPLLAPPAHYPQLAAGWGYVSWSHSGEQLLLGWSPQPVGVDLEPADRP HHHHHHCCCCCCCCCCCCCCCCCCHHCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCC IRADSLWRRLCPGEPPPAALADAVLQRWVALEALTKRRCSSIAVELGRWSWQLEQGRAVH CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHH RGDQHNVDVVAQRHHLQQRSWWLGWSGGAMPAVALEEGG CCCCCCHHHHHHHHHHHHHCEEEEECCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA