Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148241493

Identifier: 148241493

GI number: 148241493

Start: 372682

End: 373203

Strand: Direct

Name: 148241493

Synonym: SynRCC307_0394

Alternate gene names: NA

Gene position: 372682-373203 (Clockwise)

Preceding gene: 148241492

Following gene: 148241494

Centisome position: 16.75

GC content: 60.73

Gene sequence:

>522_bases
ATGGTTCAACCCCTACGGCTCAGCATGATCGTGCTGCTCACCCTGCTTGGGGTGTGTGGCTTGGTGCGTTTGCCGTTGAT
GCCACCGTTGTTGGCCCGTTCGGGTTCCGATACGCAGCTCTCCGATCTCGAAGCCCAGGAAGCGTTGTTGGAAGCTCGGC
AAGAGGCGGCCTCACAAATGACGCGATTTGTGGGCGGGCAGATCACGCGCCACTACTGGGGCGGTTTCACCCCTTATCTG
GATGTCTTGGGGGTGGAGATCCCCGAGACGATGGAATCAACCCTCACGGTGGGTGATGACCGGGCGCGCTTGGTGCTCGA
TCCCAAGCGGGTGAATGAGCGTTATGTCGCTGAGGTGGTGCGCGCCGGAACGCGCGCTCGCGGTGTGGTGTGCCGCGGCC
AAGGGGAGCCGGGTGCGTTTGTGTTGCGCGGCCGACGTCTCGATTGTCCGGAGGGTTGGCTTGTGATTAACGACCCCCTA
TTGACGTCGTCTGGAGAACAACAACCAGAGCCGATTAATTAA

Upstream 100 bases:

>100_bases
GGCCCAGCGCCATCACCTGCAGCAGCGCAGCTGGTGGCTGGGCTGGAGTGGTGGTGCGATGCCCGCTGTAGCGCTTGAGG
AAGGCGGCTAAGGTCCGCCC

Downstream 100 bases:

>100_bases
AACAATCAGAGACTCGCCAATCTTGTTGGCGGTTTTTTACCCCGTGGCTAAGTTTTTGAGTGACGTGTCCGCCTCGCTCT
CATGCTGAAGCGCATCTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MVQPLRLSMIVLLTLLGVCGLVRLPLMPPLLARSGSDTQLSDLEAQEALLEARQEAASQMTRFVGGQITRHYWGGFTPYL
DVLGVEIPETMESTLTVGDDRARLVLDPKRVNERYVAEVVRAGTRARGVVCRGQGEPGAFVLRGRRLDCPEGWLVINDPL
LTSSGEQQPEPIN

Sequences:

>Translated_173_residues
MVQPLRLSMIVLLTLLGVCGLVRLPLMPPLLARSGSDTQLSDLEAQEALLEARQEAASQMTRFVGGQITRHYWGGFTPYL
DVLGVEIPETMESTLTVGDDRARLVLDPKRVNERYVAEVVRAGTRARGVVCRGQGEPGAFVLRGRRLDCPEGWLVINDPL
LTSSGEQQPEPIN
>Mature_173_residues
MVQPLRLSMIVLLTLLGVCGLVRLPLMPPLLARSGSDTQLSDLEAQEALLEARQEAASQMTRFVGGQITRHYWGGFTPYL
DVLGVEIPETMESTLTVGDDRARLVLDPKRVNERYVAEVVRAGTRARGVVCRGQGEPGAFVLRGRRLDCPEGWLVINDPL
LTSSGEQQPEPIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19007; Mature: 19007

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQPLRLSMIVLLTLLGVCGLVRLPLMPPLLARSGSDTQLSDLEAQEALLEARQEAASQM
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
TRFVGGQITRHYWGGFTPYLDVLGVEIPETMESTLTVGDDRARLVLDPKRVNERYVAEVV
HHHHCCHHHHHHCCCCCHHHHHHCCCCCHHHHHHEECCCCCEEEEECHHHHHHHHHHHHH
RAGTRARGVVCRGQGEPGAFVLRGRRLDCPEGWLVINDPLLTSSGEQQPEPIN
HCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCEEECCCEECCCCCCCCCCCC
>Mature Secondary Structure
MVQPLRLSMIVLLTLLGVCGLVRLPLMPPLLARSGSDTQLSDLEAQEALLEARQEAASQM
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
TRFVGGQITRHYWGGFTPYLDVLGVEIPETMESTLTVGDDRARLVLDPKRVNERYVAEVV
HHHHCCHHHHHHCCCCCHHHHHHCCCCCHHHHHHEECCCCCEEEEECHHHHHHHHHHHHH
RAGTRARGVVCRGQGEPGAFVLRGRRLDCPEGWLVINDPLLTSSGEQQPEPIN
HCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCEEECCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA