| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is coaX [H]
Identifier: 148241490
GI number: 148241490
Start: 370880
End: 371569
Strand: Direct
Name: coaX [H]
Synonym: SynRCC307_0391
Alternate gene names: 148241490
Gene position: 370880-371569 (Clockwise)
Preceding gene: 148241489
Following gene: 148241492
Centisome position: 16.67
GC content: 67.39
Gene sequence:
>690_bases ATGCGGCGTTGGCTGCTGATTGGCAACAGCCGCTGGCATTGGGCGGCTCTGGCGCCTGATCAGTCGCTTCAGCTCTGGCA CACCAGTGCGGCCGCTGGCCTCAAGCAGCTGCAGCAGGCTCCGGAAGCCTGGGCTGCTGTGGGGCCTGTGCCAAAAGACC TCGAGCGCTGGCAGCCGCAGCGCCTGCTCACCTCTGATGTCCCCTTGGCCAACCTTCCCCCGACCTTGGGCGTGGATCGC GCCCTGGCGGCTTGGGGCGCATGGCAGCAGTGCCGCCAACCTGTGCTGGTGGCTGATGCCGGCACGGCCTTGAGCCTGAC GCTGGTGGATGCCGCCGGTTGTTTCTTGGGGGGGCGGCTGATGGCTGGCGGGCGCTTGCAATTGCAGGCGCTACATCAGG GCACCGCAGATCTGCCGCAGCTGGAGCCGGTGGAGGCGGCAGGACCGCTCTGGGCCACGCAAACCTCCGAGGCCATGGCC AGTGGTGTGGCGCGGGGGCTGGCTGCAGCGATTGCTTTGGCTTTTCACGACAGACCCCAGCCGCCGTGGCCGTGGCAGCT GTGGCTCACCGGTGGTGATGCCCCCGTCTTGATGCCCTTACTGCAGGCCCAAGGCCTGCAGCCTCACCACGATGAAGGCC TGGCTTTAGCGGCGTTGGTGGCGCTTAGCCGGCCAGCTCAAGATCCTTGA
Upstream 100 bases:
>100_bases CGACGATGGTTTGGGTCGGGCTAGCCGCTTTGGCGGTCGCCATCAGGAGTGCGGCTTGCATCTGCCGGAACCTTTGGTGG AAGGCGCCGGGATTTGAGCG
Downstream 100 bases:
>100_bases GGATGTCATCGGCCATGGTGGCGGCTTTCACCTTTTTGTAGATCTTCTCGAGCTTGCCGTCGGCATCGATCACAAAGGTG TGGCGCATCATGCCCATGTA
Product: transcriptional regulator
Products: NA
Alternate protein names: PanK-III; Pantothenic acid kinase [H]
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MRRWLLIGNSRWHWAALAPDQSLQLWHTSAAAGLKQLQQAPEAWAAVGPVPKDLERWQPQRLLTSDVPLANLPPTLGVDR ALAAWGAWQQCRQPVLVADAGTALSLTLVDAAGCFLGGRLMAGGRLQLQALHQGTADLPQLEPVEAAGPLWATQTSEAMA SGVARGLAAAIALAFHDRPQPPWPWQLWLTGGDAPVLMPLLQAQGLQPHHDEGLALAALVALSRPAQDP
Sequences:
>Translated_229_residues MRRWLLIGNSRWHWAALAPDQSLQLWHTSAAAGLKQLQQAPEAWAAVGPVPKDLERWQPQRLLTSDVPLANLPPTLGVDR ALAAWGAWQQCRQPVLVADAGTALSLTLVDAAGCFLGGRLMAGGRLQLQALHQGTADLPQLEPVEAAGPLWATQTSEAMA SGVARGLAAAIALAFHDRPQPPWPWQLWLTGGDAPVLMPLLQAQGLQPHHDEGLALAALVALSRPAQDP >Mature_229_residues MRRWLLIGNSRWHWAALAPDQSLQLWHTSAAAGLKQLQQAPEAWAAVGPVPKDLERWQPQRLLTSDVPLANLPPTLGVDR ALAAWGAWQQCRQPVLVADAGTALSLTLVDAAGCFLGGRLMAGGRLQLQALHQGTADLPQLEPVEAAGPLWATQTSEAMA SGVARGLAAAIALAFHDRPQPPWPWQLWLTGGDAPVLMPLLQAQGLQPHHDEGLALAALVALSRPAQDP
Specific function: Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis [H]
COG id: COG1521
COG function: function code K; Putative transcriptional regulator, homolog of Bvg accessory factor
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type III pantothenate kinase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004619 [H]
Pfam domain/function: PF03309 Bvg_acc_factor [H]
EC number: =2.7.1.33 [H]
Molecular weight: Translated: 24452; Mature: 24452
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRWLLIGNSRWHWAALAPDQSLQLWHTSAAAGLKQLQQAPEAWAAVGPVPKDLERWQPQ CCEEEEECCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCH RLLTSDVPLANLPPTLGVDRALAAWGAWQQCRQPVLVADAGTALSLTLVDAAGCFLGGRL HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEEHHHHHHHCCEE MAGGRLQLQALHQGTADLPQLEPVEAAGPLWATQTSEAMASGVARGLAAAIALAFHDRPQ ECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC PPWPWQLWLTGGDAPVLMPLLQAQGLQPHHDEGLALAALVALSRPAQDP CCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MRRWLLIGNSRWHWAALAPDQSLQLWHTSAAAGLKQLQQAPEAWAAVGPVPKDLERWQPQ CCEEEEECCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCH RLLTSDVPLANLPPTLGVDRALAAWGAWQQCRQPVLVADAGTALSLTLVDAAGCFLGGRL HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEEHHHHHHHCCEE MAGGRLQLQALHQGTADLPQLEPVEAAGPLWATQTSEAMASGVARGLAAAIALAFHDRPQ ECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC PPWPWQLWLTGGDAPVLMPLLQAQGLQPHHDEGLALAALVALSRPAQDP CCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA