Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148241401

Identifier: 148241401

GI number: 148241401

Start: 297969

End: 298922

Strand: Direct

Name: 148241401

Synonym: SynRCC307_0302

Alternate gene names: NA

Gene position: 297969-298922 (Clockwise)

Preceding gene: 148241400

Following gene: 148241405

Centisome position: 13.39

GC content: 61.64

Gene sequence:

>954_bases
GTGACAGCCTCACGCCAGCGCCCCGAGCCGCCCTTCCGCCGTTGGGTGCGGCCTGTGATGGGTGGTCTGGCCACCATCGG
TGCCATTGATACGGCCTCGATCACCCTCGAGCGCTGGGGTGTGATTGGCGAGTTGGCCTGCCCTGGTGGGGCCGATGGTT
GCGACAAGGTGCTCAACAGTGCCTGGGGAACAGTGCTGGGCCAGCCCCTGGCGCTGTTTGGCTTCTTGGCCTATCTGGCC
TTGGTGCTGCTCTCGTTGTTGCCGCTCATTCCGGCGGTGCAGCAGTGGTTGATCGATCGCCAGAGCAGCAGCGGTGGTTT
AACTGCTCGCCGCTTTGGCCGCGGCCCCGATTTGTTTTGGCACCTGGGCTATCTGCTGAGCTTGGGCATGAGCGTGTTCA
GCGCCGCCTTGGTGGGCTTGATGCTGTTCAAGATTCAAGCGATCTGCGCGTTCTGTCTGCTCTCAGCAGGCTTGAGCCTG
GCCTTGTGGCTGCTGCATTTGCTCGGCCGTGAATGGGAAGACAGCGGTCAGGTGCTGTTCCGCAGTGTGATCTTGGTGGT
GCTGGTGGGCTTGCTGAGCCTGGCCTGGGTGGCCTCGGCTGATCGCCCAGCTGTGTTGAGTGAAAAAGGCGCCCCGCCGG
TTGTGACCAGCGTGAGCAATCCAGCCAAGTTGGCCTTGGCTGAGCATCTCAGCAGCATCGGCGCTCGCATGTATTCGGCC
TATTGGTGCCCCCATTGCCATGAGCAGAAGGAGCTCTTTGGCCAGGAAGCAGCCGCCAAGCTCGATGTGATCGAGTGCGC
CACCGATGGCAAAAACTCCCAGGCGTCGCTCTGCCAAAGCAAGGCGATCGAAGGCTTCCCCAGCTGGGAGATCAAGGGTC
AAATCGATTCCGGTGTGAAGTCGCTGCAGAAGCTGGCTGACCTCAGCGGTTATCAAGGCCCGCGGAACTTCTGA

Upstream 100 bases:

>100_bases
GATAGCCTGTTGGCCAATCCGGTGGATCCCTTGCGGGTGCAAGCCCTACGCCAAACCTTGCAGCGATGCCAAACTTCCTG
AGTAAGGAAATCAAGAGCGA

Downstream 100 bases:

>100_bases
TCGGTTGATCGCGCTGCTGCAGTGAGTGGTGCTGCCAGTAGGGAAGGGTTGCGGGGGCATCACAGCGGAAATGGCCGCCG
CGGCTTTCTTGGCGGAAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MTASRQRPEPPFRRWVRPVMGGLATIGAIDTASITLERWGVIGELACPGGADGCDKVLNSAWGTVLGQPLALFGFLAYLA
LVLLSLLPLIPAVQQWLIDRQSSSGGLTARRFGRGPDLFWHLGYLLSLGMSVFSAALVGLMLFKIQAICAFCLLSAGLSL
ALWLLHLLGREWEDSGQVLFRSVILVVLVGLLSLAWVASADRPAVLSEKGAPPVVTSVSNPAKLALAEHLSSIGARMYSA
YWCPHCHEQKELFGQEAAAKLDVIECATDGKNSQASLCQSKAIEGFPSWEIKGQIDSGVKSLQKLADLSGYQGPRNF

Sequences:

>Translated_317_residues
MTASRQRPEPPFRRWVRPVMGGLATIGAIDTASITLERWGVIGELACPGGADGCDKVLNSAWGTVLGQPLALFGFLAYLA
LVLLSLLPLIPAVQQWLIDRQSSSGGLTARRFGRGPDLFWHLGYLLSLGMSVFSAALVGLMLFKIQAICAFCLLSAGLSL
ALWLLHLLGREWEDSGQVLFRSVILVVLVGLLSLAWVASADRPAVLSEKGAPPVVTSVSNPAKLALAEHLSSIGARMYSA
YWCPHCHEQKELFGQEAAAKLDVIECATDGKNSQASLCQSKAIEGFPSWEIKGQIDSGVKSLQKLADLSGYQGPRNF
>Mature_316_residues
TASRQRPEPPFRRWVRPVMGGLATIGAIDTASITLERWGVIGELACPGGADGCDKVLNSAWGTVLGQPLALFGFLAYLAL
VLLSLLPLIPAVQQWLIDRQSSSGGLTARRFGRGPDLFWHLGYLLSLGMSVFSAALVGLMLFKIQAICAFCLLSAGLSLA
LWLLHLLGREWEDSGQVLFRSVILVVLVGLLSLAWVASADRPAVLSEKGAPPVVTSVSNPAKLALAEHLSSIGARMYSAY
WCPHCHEQKELFGQEAAAKLDVIECATDGKNSQASLCQSKAIEGFPSWEIKGQIDSGVKSLQKLADLSGYQGPRNF

Specific function: Unknown

COG id: COG4243

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34045; Mature: 33914

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASRQRPEPPFRRWVRPVMGGLATIGAIDTASITLERWGVIGELACPGGADGCDKVLNS
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHCCCCCCCCHHHHHHHHH
AWGTVLGQPLALFGFLAYLALVLLSLLPLIPAVQQWLIDRQSSSGGLTARRFGRGPDLFW
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHH
HLGYLLSLGMSVFSAALVGLMLFKIQAICAFCLLSAGLSLALWLLHLLGREWEDSGQVLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
RSVILVVLVGLLSLAWVASADRPAVLSEKGAPPVVTSVSNPAKLALAEHLSSIGARMYSA
HHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHH
YWCPHCHEQKELFGQEAAAKLDVIECATDGKNSQASLCQSKAIEGFPSWEIKGQIDSGVK
HCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEECCCHHHHHH
SLQKLADLSGYQGPRNF
HHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TASRQRPEPPFRRWVRPVMGGLATIGAIDTASITLERWGVIGELACPGGADGCDKVLNS
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHCCCCCCCCHHHHHHHHH
AWGTVLGQPLALFGFLAYLALVLLSLLPLIPAVQQWLIDRQSSSGGLTARRFGRGPDLFW
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHH
HLGYLLSLGMSVFSAALVGLMLFKIQAICAFCLLSAGLSLALWLLHLLGREWEDSGQVLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
RSVILVVLVGLLSLAWVASADRPAVLSEKGAPPVVTSVSNPAKLALAEHLSSIGARMYSA
HHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHH
YWCPHCHEQKELFGQEAAAKLDVIECATDGKNSQASLCQSKAIEGFPSWEIKGQIDSGVK
HCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEECCCHHHHHH
SLQKLADLSGYQGPRNF
HHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA