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The map label for this gene is bptA [H]

Identifier: 148241400

GI number: 148241400

Start: 297122

End: 297949

Strand: Direct

Name: bptA [H]

Synonym: SynRCC307_0301

Alternate gene names: 148241400

Gene position: 297122-297949 (Clockwise)

Preceding gene: 148241397

Following gene: 148241401

Centisome position: 13.35

GC content: 65.22

Gene sequence:

>828_bases
TTGGTGGCTGCTGCTCCCTGGTCATCGCTGTTTGCCCATGACCGGCCGGCATTGATCGGCGTGTTGCATCTGCCGCCGTT
GCCGGGCAGTCCGCGCTGGCAGGGTGATTTCGAAGCAGTGCGTCGCTTTGCCCTGGCTGATGCAGCGGCCTACCTGGCGG
GCGGCGCTGATGGCTTGGTGGTGGAGAACTTCGGCGATGCGCCCTTTTTTGCCTCCGCCGTGCCGTCCCACACCGTTGCG
GCCATGGCCCGTATCGCTGCTGAGGTGGTGGAGGCTGCCGCCGGAGTGCCGGTGGGGATCAATGTGCTGCGCAATGACGC
CCATGCCGCCATGGGGATTGCTGCGGCCAGCGGCGCCTCCTTTGTGCGGGTGAATGTGCTCAGCGGCGCCATGCTCACCG
ATCAGGGCCTGATTGAAGGGCGCGCAGCAGAGTTGCTGCGTTTGCGCCGGCAGCTGGAGGCCACAGAGGTTGGGATTTTT
GCTGATGTGTTGGTGAAGCACGCCTACCCGCTGGCGCCCCAGCCGATCGGGGAAGCCGTGGAGGATTGCTTGGGCCGAGC
CGGCGCCGATGGTGTGATCGTTAGTGGTGTGGCCACCGGTGCTGCTCCCGATCCTGATGATCTGGCCGCAGCTCGATCGG
CTGCTGGCAGCGCTCCGGTGTTGATTGGCAGTGGTTGCCATGCGGGCAATGCCACCAGCCTGGGGGCCAGCGCCGATGGC
GTGATTGTGGCCAGCTCGCTCAAGCGCGATAGCCTGTTGGCCAATCCGGTGGATCCCTTGCGGGTGCAAGCCCTACGCCA
AACCTTGCAGCGATGCCAAACTTCCTGA

Upstream 100 bases:

>100_bases
CGGTTTTTTTCGCAGCCCAGGTGGGCAAAGGCCACCGTGGGCCGGGCGGTGGTTGCTGTGGAAGCCATGGCAGCATCAGC
CCAACAGTTCAACGTAAACC

Downstream 100 bases:

>100_bases
GTAAGGAAATCAAGAGCGAGTGACAGCCTCACGCCAGCGCCCCGAGCCGCCCTTCCGCCGTTGGGTGCGGCCTGTGATGG
GTGGTCTGGCCACCATCGGT

Product: photosystem I biogenesis protein BtpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MVAAAPWSSLFAHDRPALIGVLHLPPLPGSPRWQGDFEAVRRFALADAAAYLAGGADGLVVENFGDAPFFASAVPSHTVA
AMARIAAEVVEAAAGVPVGINVLRNDAHAAMGIAAASGASFVRVNVLSGAMLTDQGLIEGRAAELLRLRRQLEATEVGIF
ADVLVKHAYPLAPQPIGEAVEDCLGRAGADGVIVSGVATGAAPDPDDLAAARSAAGSAPVLIGSGCHAGNATSLGASADG
VIVASSLKRDSLLANPVDPLRVQALRQTLQRCQTS

Sequences:

>Translated_275_residues
MVAAAPWSSLFAHDRPALIGVLHLPPLPGSPRWQGDFEAVRRFALADAAAYLAGGADGLVVENFGDAPFFASAVPSHTVA
AMARIAAEVVEAAAGVPVGINVLRNDAHAAMGIAAASGASFVRVNVLSGAMLTDQGLIEGRAAELLRLRRQLEATEVGIF
ADVLVKHAYPLAPQPIGEAVEDCLGRAGADGVIVSGVATGAAPDPDDLAAARSAAGSAPVLIGSGCHAGNATSLGASADG
VIVASSLKRDSLLANPVDPLRVQALRQTLQRCQTS
>Mature_275_residues
MVAAAPWSSLFAHDRPALIGVLHLPPLPGSPRWQGDFEAVRRFALADAAAYLAGGADGLVVENFGDAPFFASAVPSHTVA
AMARIAAEVVEAAAGVPVGINVLRNDAHAAMGIAAASGASFVRVNVLSGAMLTDQGLIEGRAAELLRLRRQLEATEVGIF
ADVLVKHAYPLAPQPIGEAVEDCLGRAGADGVIVSGVATGAAPDPDDLAAARSAAGSAPVLIGSGCHAGNATSLGASADG
VIVASSLKRDSLLANPVDPLRVQALRQTLQRCQTS

Specific function: Regulates a post-transcriptional process during the life cycle of the PSI protein complex such as (1) translation of the psaAB mRNA, (2) assembly of the PsaA/PsaB polypeptides and their associated cofactors into a functional complex, or (3) degradation of

COG id: COG0434

COG function: function code R; Predicted TIM-barrel enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BtpA family [H]

Homologues:

Organism=Escherichia coli, GI1790757, Length=261, Percent_Identity=28.3524904214559, Blast_Score=97, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI115532828, Length=280, Percent_Identity=32.1428571428571, Blast_Score=120, Evalue=6e-28,
Organism=Drosophila melanogaster, GI24659916, Length=273, Percent_Identity=29.6703296703297, Blast_Score=117, Evalue=8e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005137
- InterPro:   IPR011060
- ProDom:   PD011184 [H]

Pfam domain/function: PF03437 BtpA [H]

EC number: NA

Molecular weight: Translated: 27800; Mature: 27800

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAAAPWSSLFAHDRPALIGVLHLPPLPGSPRWQGDFEAVRRFALADAAAYLAGGADGLV
CCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEE
VENFGDAPFFASAVPSHTVAAMARIAAEVVEAAAGVPVGINVLRNDAHAAMGIAAASGAS
EECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHCCCCC
FVRVNVLSGAMLTDQGLIEGRAAELLRLRRQLEATEVGIFADVLVKHAYPLAPQPIGEAV
EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
EDCLGRAGADGVIVSGVATGAAPDPDDLAAARSAAGSAPVLIGSGCHAGNATSLGASADG
HHHHCCCCCCCEEEECEECCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCC
VIVASSLKRDSLLANPVDPLRVQALRQTLQRCQTS
EEEECCCCCCHHHCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVAAAPWSSLFAHDRPALIGVLHLPPLPGSPRWQGDFEAVRRFALADAAAYLAGGADGLV
CCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEE
VENFGDAPFFASAVPSHTVAAMARIAAEVVEAAAGVPVGINVLRNDAHAAMGIAAASGAS
EECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHCCCCC
FVRVNVLSGAMLTDQGLIEGRAAELLRLRRQLEATEVGIFADVLVKHAYPLAPQPIGEAV
EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
EDCLGRAGADGVIVSGVATGAAPDPDDLAAARSAAGSAPVLIGSGCHAGNATSLGASADG
HHHHCCCCCCCEEEECEECCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCC
VIVASSLKRDSLLANPVDPLRVQALRQTLQRCQTS
EEEECCCCCCHHHCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9045660; 8905231 [H]