Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148241344

Identifier: 148241344

GI number: 148241344

Start: 243739

End: 244299

Strand: Direct

Name: 148241344

Synonym: SynRCC307_0245

Alternate gene names: NA

Gene position: 243739-244299 (Clockwise)

Preceding gene: 148241343

Following gene: 148241350

Centisome position: 10.95

GC content: 66.13

Gene sequence:

>561_bases
ATGCGGCGCCTGTTGCGATGGAGCGTGGTGGTGCTGCTGCTCTGGGGTGGTTGGCGTTTGCTGCCGCGGCTGCTGGAGCC
CTGGATGCCGCCGCCGCAAATGATCCTGGTTTTGGGCGGTGATGTGGAGCGGGAAAAGCAGGCTGCTGCCTTGGCGCGCC
AGAGCAACCTGCCGGTGCTGATCACCGGCGGCAGCAATCCGGAATATGCCCAGTGGGTGTTTGAAGGCCAGGGCGTTGAT
GCCCAGAAGTTGCAGCTCGATTACGCCGCCCGCGACACCCTCAGCAACTTCACCACCCTGGTGGACCGGTTGCGCCGCCG
CGGCATTCGCCATGTCTTGCTGGTCACTAGCAGCGATCACATGGACCGGGCTCTGCTGGTGGGCCGTGTGGTGGCTGGCA
GCCGCGGTATCCATCTCACCCCGGTGCCGGTGCCCTGCGGCGACGACTGCCGCCCGGAGCGGCGCAGCAAGGTTTGGGGT
GATGGGGTGCGGGCCTTGGTGTGGGTAGTCAGTGGCCGCGACCTCAAAGAGGAGATGCAGGGTGCTCCAGCAGGGCGTTG
A

Upstream 100 bases:

>100_bases
TGCAGCTGTTGCAGCTGGGCCAGGTGGCGGCTGCAGCCAAGCAGCCAGGCCCGTGGCAGCCAGTGCTGCCGATCTATCCC
ACCTCGCCGGTGCAGAGCTG

Downstream 100 bases:

>100_bases
TCGCCAGTTGGCATTCCGCCGTGGTGGCGTCCAGATCAGCGCGGCTGCGGCTGGCCGGCGGCTCAATCGGATGGCCGACG
CGAATCTCCACAGCCACCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MRRLLRWSVVVLLLWGGWRLLPRLLEPWMPPPQMILVLGGDVEREKQAAALARQSNLPVLITGGSNPEYAQWVFEGQGVD
AQKLQLDYAARDTLSNFTTLVDRLRRRGIRHVLLVTSSDHMDRALLVGRVVAGSRGIHLTPVPVPCGDDCRPERRSKVWG
DGVRALVWVVSGRDLKEEMQGAPAGR

Sequences:

>Translated_186_residues
MRRLLRWSVVVLLLWGGWRLLPRLLEPWMPPPQMILVLGGDVEREKQAAALARQSNLPVLITGGSNPEYAQWVFEGQGVD
AQKLQLDYAARDTLSNFTTLVDRLRRRGIRHVLLVTSSDHMDRALLVGRVVAGSRGIHLTPVPVPCGDDCRPERRSKVWG
DGVRALVWVVSGRDLKEEMQGAPAGR
>Mature_186_residues
MRRLLRWSVVVLLLWGGWRLLPRLLEPWMPPPQMILVLGGDVEREKQAAALARQSNLPVLITGGSNPEYAQWVFEGQGVD
AQKLQLDYAARDTLSNFTTLVDRLRRRGIRHVLLVTSSDHMDRALLVGRVVAGSRGIHLTPVPVPCGDDCRPERRSKVWG
DGVRALVWVVSGRDLKEEMQGAPAGR

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20815; Mature: 20815

Theoretical pI: Translated: 10.78; Mature: 10.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLLRWSVVVLLLWGGWRLLPRLLEPWMPPPQMILVLGGDVEREKQAAALARQSNLPVL
CCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEE
ITGGSNPEYAQWVFEGQGVDAQKLQLDYAARDTLSNFTTLVDRLRRRGIRHVLLVTSSDH
EECCCCCCCEEEEECCCCCCHHHHEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
MDRALLVGRVVAGSRGIHLTPVPVPCGDDCRPERRSKVWGDGVRALVWVVSGRDLKEEMQ
HHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHCCHHEEEEEEECCCCHHHHHC
GAPAGR
CCCCCC
>Mature Secondary Structure
MRRLLRWSVVVLLLWGGWRLLPRLLEPWMPPPQMILVLGGDVEREKQAAALARQSNLPVL
CCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEE
ITGGSNPEYAQWVFEGQGVDAQKLQLDYAARDTLSNFTTLVDRLRRRGIRHVLLVTSSDH
EECCCCCCCEEEEECCCCCCHHHHEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
MDRALLVGRVVAGSRGIHLTPVPVPCGDDCRPERRSKVWGDGVRALVWVVSGRDLKEEMQ
HHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHCCHHEEEEEEECCCCHHHHHC
GAPAGR
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA