Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148241343

Identifier: 148241343

GI number: 148241343

Start: 243143

End: 243739

Strand: Direct

Name: 148241343

Synonym: SynRCC307_0244

Alternate gene names: NA

Gene position: 243143-243739 (Clockwise)

Preceding gene: 148241342

Following gene: 148241344

Centisome position: 10.93

GC content: 68.34

Gene sequence:

>597_bases
ATGAGCTGCGCCCTTGCCCTGCATAGCTGCAGCCCAGCCCTAGGTTTGGCCTTGCTTGATGGCGGCCAGAGCCGCTCGAT
TGCCCATCCCCTGGGACGGCAATTGGCCAATGGTCTGTTTGAAGCGGTGGAGGAGCTGTTGCCGGCAGCCCGTTGGCCCC
AGCTGCAGTGGTTGGCTGTGGCCACGGGCCCTGGCGGCTTCACCGGCACCCGGCTCACGGTGGTGTTGGCGCGCACCTTG
GCGCAGCAGGTGGGCTGCCCCTTGTGGGGTTGGGGCAGCTTTGAGCTGATTGCCAGGCGCCGGCAGCAGGAACTGCAGGG
CTTGGAGGCCTGTTGGATCGGCCAGACCTTGCCGCGCCGGGGCGTGGTGGCCGGCCGCTATTGCTGGCAGAGCCAAGGGG
TGGTGGAGCTGGAAGCGCCGCGGCTCTACCGCCAGGGTTGGAGCGAGTTGCCCGGTCCCAGCTGGGAAGCGGAGATGGAT
GCGGCGGCTGACGCCTTGCAGCTGTTGCAGCTGGGCCAGGTGGCGGCTGCAGCCAAGCAGCCAGGCCCGTGGCAGCCAGT
GCTGCCGATCTATCCCACCTCGCCGGTGCAGAGCTGA

Upstream 100 bases:

>100_bases
AGAACAGCTGGGGCATCGAGTGGGATGTGCGCTCCTGCAGCAGTTTTGCCCTCGATCGCGGCCACTGGCAGCGGTTGCGC
CCTGGGGCGCCGGTGCCCAC

Downstream 100 bases:

>100_bases
TGCGGCGCCTGTTGCGATGGAGCGTGGTGGTGCTGCTGCTCTGGGGTGGTTGGCGTTTGCTGCCGCGGCTGCTGGAGCCC
TGGATGCCGCCGCCGCAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Peptidase; Molecular Chaperone; Glycoprotease Family; Inactive Metal-Dependent Protease

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MSCALALHSCSPALGLALLDGGQSRSIAHPLGRQLANGLFEAVEELLPAARWPQLQWLAVATGPGGFTGTRLTVVLARTL
AQQVGCPLWGWGSFELIARRRQQELQGLEACWIGQTLPRRGVVAGRYCWQSQGVVELEAPRLYRQGWSELPGPSWEAEMD
AAADALQLLQLGQVAAAAKQPGPWQPVLPIYPTSPVQS

Sequences:

>Translated_198_residues
MSCALALHSCSPALGLALLDGGQSRSIAHPLGRQLANGLFEAVEELLPAARWPQLQWLAVATGPGGFTGTRLTVVLARTL
AQQVGCPLWGWGSFELIARRRQQELQGLEACWIGQTLPRRGVVAGRYCWQSQGVVELEAPRLYRQGWSELPGPSWEAEMD
AAADALQLLQLGQVAAAAKQPGPWQPVLPIYPTSPVQS
>Mature_197_residues
SCALALHSCSPALGLALLDGGQSRSIAHPLGRQLANGLFEAVEELLPAARWPQLQWLAVATGPGGFTGTRLTVVLARTLA
QQVGCPLWGWGSFELIARRRQQELQGLEACWIGQTLPRRGVVAGRYCWQSQGVVELEAPRLYRQGWSELPGPSWEAEMDA
AADALQLLQLGQVAAAAKQPGPWQPVLPIYPTSPVQS

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21340; Mature: 21209

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCALALHSCSPALGLALLDGGQSRSIAHPLGRQLANGLFEAVEELLPAARWPQLQWLAV
CCCEEEHHCCCHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
ATGPGGFTGTRLTVVLARTLAQQVGCPLWGWGSFELIARRRQQELQGLEACWIGQTLPRR
EECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GVVAGRYCWQSQGVVELEAPRLYRQGWSELPGPSWEAEMDAAADALQLLQLGQVAAAAKQ
CCEECHHHCCCCCEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PGPWQPVLPIYPTSPVQS
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SCALALHSCSPALGLALLDGGQSRSIAHPLGRQLANGLFEAVEELLPAARWPQLQWLAV
CCEEEHHCCCHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
ATGPGGFTGTRLTVVLARTLAQQVGCPLWGWGSFELIARRRQQELQGLEACWIGQTLPRR
EECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GVVAGRYCWQSQGVVELEAPRLYRQGWSELPGPSWEAEMDAAADALQLLQLGQVAAAAKQ
CCEECHHHCCCCCEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PGPWQPVLPIYPTSPVQS
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA