| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241343
Identifier: 148241343
GI number: 148241343
Start: 243143
End: 243739
Strand: Direct
Name: 148241343
Synonym: SynRCC307_0244
Alternate gene names: NA
Gene position: 243143-243739 (Clockwise)
Preceding gene: 148241342
Following gene: 148241344
Centisome position: 10.93
GC content: 68.34
Gene sequence:
>597_bases ATGAGCTGCGCCCTTGCCCTGCATAGCTGCAGCCCAGCCCTAGGTTTGGCCTTGCTTGATGGCGGCCAGAGCCGCTCGAT TGCCCATCCCCTGGGACGGCAATTGGCCAATGGTCTGTTTGAAGCGGTGGAGGAGCTGTTGCCGGCAGCCCGTTGGCCCC AGCTGCAGTGGTTGGCTGTGGCCACGGGCCCTGGCGGCTTCACCGGCACCCGGCTCACGGTGGTGTTGGCGCGCACCTTG GCGCAGCAGGTGGGCTGCCCCTTGTGGGGTTGGGGCAGCTTTGAGCTGATTGCCAGGCGCCGGCAGCAGGAACTGCAGGG CTTGGAGGCCTGTTGGATCGGCCAGACCTTGCCGCGCCGGGGCGTGGTGGCCGGCCGCTATTGCTGGCAGAGCCAAGGGG TGGTGGAGCTGGAAGCGCCGCGGCTCTACCGCCAGGGTTGGAGCGAGTTGCCCGGTCCCAGCTGGGAAGCGGAGATGGAT GCGGCGGCTGACGCCTTGCAGCTGTTGCAGCTGGGCCAGGTGGCGGCTGCAGCCAAGCAGCCAGGCCCGTGGCAGCCAGT GCTGCCGATCTATCCCACCTCGCCGGTGCAGAGCTGA
Upstream 100 bases:
>100_bases AGAACAGCTGGGGCATCGAGTGGGATGTGCGCTCCTGCAGCAGTTTTGCCCTCGATCGCGGCCACTGGCAGCGGTTGCGC CCTGGGGCGCCGGTGCCCAC
Downstream 100 bases:
>100_bases TGCGGCGCCTGTTGCGATGGAGCGTGGTGGTGCTGCTGCTCTGGGGTGGTTGGCGTTTGCTGCCGCGGCTGCTGGAGCCC TGGATGCCGCCGCCGCAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Peptidase; Molecular Chaperone; Glycoprotease Family; Inactive Metal-Dependent Protease
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MSCALALHSCSPALGLALLDGGQSRSIAHPLGRQLANGLFEAVEELLPAARWPQLQWLAVATGPGGFTGTRLTVVLARTL AQQVGCPLWGWGSFELIARRRQQELQGLEACWIGQTLPRRGVVAGRYCWQSQGVVELEAPRLYRQGWSELPGPSWEAEMD AAADALQLLQLGQVAAAAKQPGPWQPVLPIYPTSPVQS
Sequences:
>Translated_198_residues MSCALALHSCSPALGLALLDGGQSRSIAHPLGRQLANGLFEAVEELLPAARWPQLQWLAVATGPGGFTGTRLTVVLARTL AQQVGCPLWGWGSFELIARRRQQELQGLEACWIGQTLPRRGVVAGRYCWQSQGVVELEAPRLYRQGWSELPGPSWEAEMD AAADALQLLQLGQVAAAAKQPGPWQPVLPIYPTSPVQS >Mature_197_residues SCALALHSCSPALGLALLDGGQSRSIAHPLGRQLANGLFEAVEELLPAARWPQLQWLAVATGPGGFTGTRLTVVLARTLA QQVGCPLWGWGSFELIARRRQQELQGLEACWIGQTLPRRGVVAGRYCWQSQGVVELEAPRLYRQGWSELPGPSWEAEMDA AADALQLLQLGQVAAAAKQPGPWQPVLPIYPTSPVQS
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21340; Mature: 21209
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCALALHSCSPALGLALLDGGQSRSIAHPLGRQLANGLFEAVEELLPAARWPQLQWLAV CCCEEEHHCCCHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE ATGPGGFTGTRLTVVLARTLAQQVGCPLWGWGSFELIARRRQQELQGLEACWIGQTLPRR EECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC GVVAGRYCWQSQGVVELEAPRLYRQGWSELPGPSWEAEMDAAADALQLLQLGQVAAAAKQ CCEECHHHCCCCCEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC PGPWQPVLPIYPTSPVQS CCCCCCCCCCCCCCCCCC >Mature Secondary Structure SCALALHSCSPALGLALLDGGQSRSIAHPLGRQLANGLFEAVEELLPAARWPQLQWLAV CCEEEHHCCCHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE ATGPGGFTGTRLTVVLARTLAQQVGCPLWGWGSFELIARRRQQELQGLEACWIGQTLPRR EECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC GVVAGRYCWQSQGVVELEAPRLYRQGWSELPGPSWEAEMDAAADALQLLQLGQVAAAAKQ CCEECHHHCCCCCEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC PGPWQPVLPIYPTSPVQS CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA