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The map label for this gene is 147675606

Identifier: 147675606

GI number: 147675606

Start: 1633470

End: 1634168

Strand: Reverse

Name: 147675606

Synonym: VC0395_A1518

Alternate gene names: NA

Gene position: 1634168-1633470 (Counterclockwise)

Preceding gene: 147675592

Following gene: 147674787

Centisome position: 54.04

GC content: 47.5

Gene sequence:

>699_bases
TTGTCTGTTCGTCACACTATTAGAGCGATGTATCACATGGAACAGTCATGGTTTTCGAGAGTCGGCCAGTTTACCGACTC
GATTGAAGAATTTCTGATCGCGTTTTTTATGGGCGCGATGACGCTACTGACCTTTGCAAACGTCATCATGCGTTATCTAT
TCAACGACAACATTCTCTGGGCGCTTGAGGGAACAGTATTTATGTTCGCTTGGATGGTGCTTATCGGGGCTTCATTTGGG
GTAAAACGCCACTTTCATATTGGTGTCGATGTGCTGATCAATATCGCACCAGCACGATTGCGTAAGCTGTATGCATTGGT
TGCTGTGGCCTGCTGTTTGGCATTTTCAATCCTCTTACTGATCGGTTCTTGGAACTACTGGTACCCCTTTATTAGCGAAC
GTGCATGGTATGAAACCGATGATATTCCCATGCCTGAAATGCTGCAGTTTCTGGCGGATTGGTTCAATGAAGGTGAGCGC
TATGAAAAGCTGCCGCGCTTTATCCCTTATGCCGCTCTGCCGATAGGTATGGCGCTGCTGACTTTCCGGTTTCTGCAGAT
CGCTTGGCAAATTCTCACTGGCAAACTGGATCGCATGATTGCCGGTCATGAAGCCGAAGAAGATTTAGAAGCACTGAAAG
CGGAGCTTTCAGAAGCGGGTGAGGCAATGATGCCTAAGACTCAAGGCAAGGAGAAGTAA

Upstream 100 bases:

>100_bases
TGGCAGAAGTTTGAGAAAGACATCGGTGCTGATCTGATTGAAGCCGCTCTGGCAGCTAACCAGAAGTAACCTTTATTTGG
CCCCATCACGGTGGGGCCGT

Downstream 100 bases:

>100_bases
GCCATGGCCGTTGCACTGTTATTTATTCTGGTTATCGGCATGATGATTGTTGGCGTGCCGATTGCTATCTCGCTGGGCTT
ATCCAGTATTTTGTTCCTAT

Product: putative C4-dicarboxylate transport protein DctQ

Products: NA

Alternate protein names: Trap Transporter Dctq Subunit; C4-Dicarboxylate Transport System Permease Small Subunit; C4-Dicarboxylate Transport Protein DctQ; C4-Dicarboxylate Transporter; TRAP-Type C4-Dicarboxylate Transport System Small Permease; TRAP-Type C4-Dicarboxylate Transport System; C4-Dicarboxylate Transport System Small Permease Component; C4-Dicarboxylate Transporter Small Permease Component; ABC Transporter; TRAP Dicarboxylate Family Transporter DctQ Subunit; TRAP-Type C4-Dicarboxylate Transporter Small Permease; TRAP Transporter DctQ-Like Membrane Protein; TRAP Transporter DctQ Subunit; Tripartite ATP-Independent Periplasmic Transporter

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MSVRHTIRAMYHMEQSWFSRVGQFTDSIEEFLIAFFMGAMTLLTFANVIMRYLFNDNILWALEGTVFMFAWMVLIGASFG
VKRHFHIGVDVLINIAPARLRKLYALVAVACCLAFSILLLIGSWNYWYPFISERAWYETDDIPMPEMLQFLADWFNEGER
YEKLPRFIPYAALPIGMALLTFRFLQIAWQILTGKLDRMIAGHEAEEDLEALKAELSEAGEAMMPKTQGKEK

Sequences:

>Translated_232_residues
MSVRHTIRAMYHMEQSWFSRVGQFTDSIEEFLIAFFMGAMTLLTFANVIMRYLFNDNILWALEGTVFMFAWMVLIGASFG
VKRHFHIGVDVLINIAPARLRKLYALVAVACCLAFSILLLIGSWNYWYPFISERAWYETDDIPMPEMLQFLADWFNEGER
YEKLPRFIPYAALPIGMALLTFRFLQIAWQILTGKLDRMIAGHEAEEDLEALKAELSEAGEAMMPKTQGKEK
>Mature_231_residues
SVRHTIRAMYHMEQSWFSRVGQFTDSIEEFLIAFFMGAMTLLTFANVIMRYLFNDNILWALEGTVFMFAWMVLIGASFGV
KRHFHIGVDVLINIAPARLRKLYALVAVACCLAFSILLLIGSWNYWYPFISERAWYETDDIPMPEMLQFLADWFNEGERY
EKLPRFIPYAALPIGMALLTFRFLQIAWQILTGKLDRMIAGHEAEEDLEALKAELSEAGEAMMPKTQGKEK

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26862; Mature: 26731

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVRHTIRAMYHMEQSWFSRVGQFTDSIEEFLIAFFMGAMTLLTFANVIMRYLFNDNILW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
ALEGTVFMFAWMVLIGASFGVKRHFHIGVDVLINIAPARLRKLYALVAVACCLAFSILLL
EEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGSWNYWYPFISERAWYETDDIPMPEMLQFLADWFNEGERYEKLPRFIPYAALPIGMALL
HHCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHH
TFRFLQIAWQILTGKLDRMIAGHEAEEDLEALKAELSEAGEAMMPKTQGKEK
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHCCCCCCCCCC
>Mature Secondary Structure 
SVRHTIRAMYHMEQSWFSRVGQFTDSIEEFLIAFFMGAMTLLTFANVIMRYLFNDNILW
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
ALEGTVFMFAWMVLIGASFGVKRHFHIGVDVLINIAPARLRKLYALVAVACCLAFSILLL
EEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGSWNYWYPFISERAWYETDDIPMPEMLQFLADWFNEGERYEKLPRFIPYAALPIGMALL
HHCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHH
TFRFLQIAWQILTGKLDRMIAGHEAEEDLEALKAELSEAGEAMMPKTQGKEK
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA