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The map label for this gene is dctP-2 [H]

Identifier: 147675592

GI number: 147675592

Start: 1634200

End: 1635198

Strand: Reverse

Name: dctP-2 [H]

Synonym: VC0395_A1519

Alternate gene names: 147675592

Gene position: 1635198-1634200 (Counterclockwise)

Preceding gene: 147674783

Following gene: 147675606

Centisome position: 54.07

GC content: 48.55

Gene sequence:

>999_bases
ATGTTCAAGCCGCTTACCCTAATTGCCGCTTCTATCCTCGCTGTCACAAGCTTTAATGCTGCCGCTAATTGTGACCCAGG
CGAAATCGTGATCAAGTTCAGCCATGTGACCAATACCGACAAACACCCGAAAGGGATTGCGGCATCACTGCTGGAAAAAC
GCGTCAACGAAGAGATGAACGGTAAAGCCTGTATGCAGGTGTTCCCTAACTCAACGCTGTACGATGATGACAAAGTGTTA
GAAGCCTTGCTCAACGGCGACGTACAACTGGCGGCACCTTCGCTGTCTAAATTTGAAAAATTCACCAAAAAGTACCGTAT
TTTTGACCTGCCTTTCCTTTTTGAAGATGTGGATGCCGTTGACCGTTTCCAAAGTTCCGCCAAGGGCGAAGAGCTGAAAA
ATGCCATGACTCGCCGTGGTGTAAAAGGCTTGGAGTTCTGGCACAACGGGATGAAGCAGATCTCTGCCAACAAGCCAATT
CTGGTGCCTGCGGATGCCAAAGGGTTGAAATTCCGTGTACAAGCGTCCGATGTGTTGGTGGCTCAGTTTGAGCAGATCGG
TGCTAACCCACAGAAAATGTCGTTTGCGGAAACCTACGGCGGTTTACAAACCAAAGTCATTGATGGACAAGAAAATACTT
GGTCAAACATCTACGGACAAAAGTACTTTGAAGTACAAGATGGCACCACCGAAACCAACCACGGCATTCTGGATTACCTC
GTGGTGACCTCAAGTAAATGGTGGGATGGCTTACCTGCAGATGTTCGAGATCAGTTTGCCAAGATCCTCAATGAAGTCAC
GATTGAGCGCAACGCAGAATCCAACAAAGTGGAAGAGCTCAATAAGCAGTACATCATTGAAGCGGGCGGTGTCGTACGCA
CTCTGACTCCAGAGCAGCGTCAGCAATGGGTCGATGCACTCAAACCGGTATGGCAGAAGTTTGAGAAAGACATCGGTGCT
GATCTGATTGAAGCCGCTCTGGCAGCTAACCAGAAGTAA

Upstream 100 bases:

>100_bases
AAATAAATGTTAGTTTTGTGTAATGAATGGCGCGCAAGTTGCTTTGGTATGGGTACGCAGTCCAATGATGGGCTGAAAAA
TCCAACCAAGGAGAATAAGA

Downstream 100 bases:

>100_bases
CCTTTATTTGGCCCCATCACGGTGGGGCCGTTTGTCTGTTCGTCACACTATTAGAGCGATGTATCACATGGAACAGTCAT
GGTTTTCGAGAGTCGGCCAG

Product: C4-dicarboxylate-binding periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MFKPLTLIAASILAVTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEKRVNEEMNGKACMQVFPNSTLYDDDKVL
EALLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDAVDRFQSSAKGEELKNAMTRRGVKGLEFWHNGMKQISANKPI
LVPADAKGLKFRVQASDVLVAQFEQIGANPQKMSFAETYGGLQTKVIDGQENTWSNIYGQKYFEVQDGTTETNHGILDYL
VVTSSKWWDGLPADVRDQFAKILNEVTIERNAESNKVEELNKQYIIEAGGVVRTLTPEQRQQWVDALKPVWQKFEKDIGA
DLIEAALAANQK

Sequences:

>Translated_332_residues
MFKPLTLIAASILAVTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEKRVNEEMNGKACMQVFPNSTLYDDDKVL
EALLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDAVDRFQSSAKGEELKNAMTRRGVKGLEFWHNGMKQISANKPI
LVPADAKGLKFRVQASDVLVAQFEQIGANPQKMSFAETYGGLQTKVIDGQENTWSNIYGQKYFEVQDGTTETNHGILDYL
VVTSSKWWDGLPADVRDQFAKILNEVTIERNAESNKVEELNKQYIIEAGGVVRTLTPEQRQQWVDALKPVWQKFEKDIGA
DLIEAALAANQK
>Mature_332_residues
MFKPLTLIAASILAVTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEKRVNEEMNGKACMQVFPNSTLYDDDKVL
EALLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDAVDRFQSSAKGEELKNAMTRRGVKGLEFWHNGMKQISANKPI
LVPADAKGLKFRVQASDVLVAQFEQIGANPQKMSFAETYGGLQTKVIDGQENTWSNIYGQKYFEVQDGTTETNHGILDYL
VVTSSKWWDGLPADVRDQFAKILNEVTIERNAESNKVEELNKQYIIEAGGVVRTLTPEQRQQWVDALKPVWQKFEKDIGA
DLIEAALAANQK

Specific function: Binds C4-dicarboxylates; part of the binding-protein- dependent transport system for uptake of C4-dicarboxylates [H]

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=328, Percent_Identity=31.0975609756098, Blast_Score=140, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 37095; Mature: 37095

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKPLTLIAASILAVTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEKRVNEEMN
CCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCC
GKACMQVFPNSTLYDDDKVLEALLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDAV
CHHHHHCCCCCCCCCHHHHHHHHHCCCCEEECCCHHHHHHHHHHHEEEECCHHHHHHHHH
DRFQSSAKGEELKNAMTRRGVKGLEFWHNGMKQISANKPILVPADAKGLKFRVQASDVLV
HHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEHHHHHH
AQFEQIGANPQKMSFAETYGGLQTKVIDGQENTWSNIYGQKYFEVQDGTTETNHGILDYL
HHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCEEEEECCCCCCCCCCCEEHE
VVTSSKWWDGLPADVRDQFAKILNEVTIERNAESNKVEELNKQYIIEAGGVVRTLTPEQR
EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEECCCEEEECCHHHH
QQWVDALKPVWQKFEKDIGADLIEAALAANQK
HHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCC
>Mature Secondary Structure
MFKPLTLIAASILAVTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEKRVNEEMN
CCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCC
GKACMQVFPNSTLYDDDKVLEALLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDAV
CHHHHHCCCCCCCCCHHHHHHHHHCCCCEEECCCHHHHHHHHHHHEEEECCHHHHHHHHH
DRFQSSAKGEELKNAMTRRGVKGLEFWHNGMKQISANKPILVPADAKGLKFRVQASDVLV
HHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEHHHHHH
AQFEQIGANPQKMSFAETYGGLQTKVIDGQENTWSNIYGQKYFEVQDGTTETNHGILDYL
HHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCEEEEECCCCCCCCCCCEEHE
VVTSSKWWDGLPADVRDQFAKILNEVTIERNAESNKVEELNKQYIIEAGGVVRTLTPEQR
EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEECCCEEEECCHHHH
QQWVDALKPVWQKFEKDIGADLIEAALAANQK
HHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1809844 [H]