| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
Click here to switch to the map view.
The map label for this gene is 147675029
Identifier: 147675029
GI number: 147675029
Start: 710356
End: 710898
Strand: Direct
Name: 147675029
Synonym: VC0395_A0685
Alternate gene names: NA
Gene position: 710356-710898 (Clockwise)
Preceding gene: 147674067
Following gene: 147674706
Centisome position: 23.49
GC content: 50.64
Gene sequence:
>543_bases ATGGGTATCTGGGTTGAAGTTACGGGTGGTGATGATTTAGAGCGCTTTCAAAAGATGCTCGATGCGCTGAGCAATCCAAA GCACAAAGAAGAGCTGTTGGCCTCGCTTGGTAGCATTGTTGAAACGCAAACCAAGATTCGGATTGCGGATGAAAAGAAAG CGCCAGACGGTACGCCTTGGGCTGCTTGGAGTGAGGGTTATGCAAGAACTCGTCATGGTAATCAGTCTCCGCTGGTCGGT GAAGGAGACCTTAGAGATTCTATCCAGTACGTGGTCGAAAAAAATCAGGTTCGAGTTGGGTCGCCATTGGTTTACGCAGG CGTACATCAAGACGGTTTTTCAGGTGCGGTACAAGTGGATGCGCACACGCGCCTTATCACTCAGGCCTTTGGTAAAGCGC TCAAGTTTCCGGTGTATCAGTCGGTGGGTGCGTTCACCCGCATGATGGATATTCCGCAACGTCAGTTCCTCGGCCTAAGC CGAGATAACCAAACCGAAGTCTACGATGTGATCGGTGACTTCTGGCAAGAGGTACTGCAATGA
Upstream 100 bases:
>100_bases CAACCATTGAAGCGCCAGCCGAAAGCAGCGTTGGCAAAGTGGAACTCATCCAAACCAATGAGCGCCTGTTTACCCGCAAC AGCCTGAGAGATGTTTTGTA
Downstream 100 bases:
>100_bases GCACCGCACGCCCAGATTTTCAGTTAGATGGTTCAACGGTTTACGCGATACAAGAAACCGTCAACTACTTAAAGCCGATC CTTGAAAGCCTGTCGGAGCG
Product: phage virion morphogenesis protein
Products: NA
Alternate protein names: Prophage MuSo2 Protein; Prophage MuSo2 Virion Morphogenesis Protein
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MGIWVEVTGGDDLERFQKMLDALSNPKHKEELLASLGSIVETQTKIRIADEKKAPDGTPWAAWSEGYARTRHGNQSPLVG EGDLRDSIQYVVEKNQVRVGSPLVYAGVHQDGFSGAVQVDAHTRLITQAFGKALKFPVYQSVGAFTRMMDIPQRQFLGLS RDNQTEVYDVIGDFWQEVLQ
Sequences:
>Translated_180_residues MGIWVEVTGGDDLERFQKMLDALSNPKHKEELLASLGSIVETQTKIRIADEKKAPDGTPWAAWSEGYARTRHGNQSPLVG EGDLRDSIQYVVEKNQVRVGSPLVYAGVHQDGFSGAVQVDAHTRLITQAFGKALKFPVYQSVGAFTRMMDIPQRQFLGLS RDNQTEVYDVIGDFWQEVLQ >Mature_179_residues GIWVEVTGGDDLERFQKMLDALSNPKHKEELLASLGSIVETQTKIRIADEKKAPDGTPWAAWSEGYARTRHGNQSPLVGE GDLRDSIQYVVEKNQVRVGSPLVYAGVHQDGFSGAVQVDAHTRLITQAFGKALKFPVYQSVGAFTRMMDIPQRQFLGLSR DNQTEVYDVIGDFWQEVLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20094; Mature: 19963
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIWVEVTGGDDLERFQKMLDALSNPKHKEELLASLGSIVETQTKIRIADEKKAPDGTPW CCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCC AAWSEGYARTRHGNQSPLVGEGDLRDSIQYVVEKNQVRVGSPLVYAGVHQDGFSGAVQVD CHHCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHCCEEECCCEEEECCCCCCCCCEEEEC AHTRLITQAFGKALKFPVYQSVGAFTRMMDIPQRQFLGLSRDNQTEVYDVIGDFWQEVLQ HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHC >Mature Secondary Structure GIWVEVTGGDDLERFQKMLDALSNPKHKEELLASLGSIVETQTKIRIADEKKAPDGTPW CEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCC AAWSEGYARTRHGNQSPLVGEGDLRDSIQYVVEKNQVRVGSPLVYAGVHQDGFSGAVQVD CHHCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHCCEEECCCEEEECCCCCCCCCEEEEC AHTRLITQAFGKALKFPVYQSVGAFTRMMDIPQRQFLGLSRDNQTEVYDVIGDFWQEVLQ HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA