| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147674067
Identifier: 147674067
GI number: 147674067
Start: 709922
End: 710356
Strand: Direct
Name: 147674067
Synonym: VC0395_A0684
Alternate gene names: NA
Gene position: 709922-710356 (Clockwise)
Preceding gene: 147673186
Following gene: 147675029
Centisome position: 23.48
GC content: 50.8
Gene sequence:
>435_bases ATGGCAATCTACGCAACCAAGCAAGACTTGATTGACCGTGACGAGCAGATGCTTTGGAACTTTGCGATCAACCGCGAAAC CGGAGAGCTGAACGATACCTACATCAACCAAGCATTGGAACAGGCCGACGATGAGATCAACTCATTCTTAGGTCGCCGCT ATCAGCTGCCGCTGCCAACGGTTCCAGGCATGTTGAATAAGATTGCCATCATCATCGCGTTTTATTGGTTGGCAGACCGT GATCAGCAGGCCACGAACTTGCTGGAAGAGCGCTACAAAATGCAGCTTGAAACCCTGCGTGAAATCGCCAGTGGTAAACG TGAGTTAGGCCTGCCAACCATTGAAGCGCCAGCCGAAAGCAGCGTTGGCAAAGTGGAACTCATCCAAACCAATGAGCGCC TGTTTACCCGCAACAGCCTGAGAGATGTTTTGTAA
Upstream 100 bases:
>100_bases CTCCGCAAGCGGCAAAGCGAATCCACGGTGAACCTAACCTAGTCGTTGAAGTGGTCGAAGTCTCAGACGTTATCGACGTA AGCGATACGGAGTAACCCAA
Downstream 100 bases:
>100_bases TGGGTATCTGGGTTGAAGTTACGGGTGGTGATGATTTAGAGCGCTTTCAAAAGATGCTCGATGCGCTGAGCAATCCAAAG CACAAAGAAGAGCTGTTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MAIYATKQDLIDRDEQMLWNFAINRETGELNDTYINQALEQADDEINSFLGRRYQLPLPTVPGMLNKIAIIIAFYWLADR DQQATNLLEERYKMQLETLREIASGKRELGLPTIEAPAESSVGKVELIQTNERLFTRNSLRDVL
Sequences:
>Translated_144_residues MAIYATKQDLIDRDEQMLWNFAINRETGELNDTYINQALEQADDEINSFLGRRYQLPLPTVPGMLNKIAIIIAFYWLADR DQQATNLLEERYKMQLETLREIASGKRELGLPTIEAPAESSVGKVELIQTNERLFTRNSLRDVL >Mature_143_residues AIYATKQDLIDRDEQMLWNFAINRETGELNDTYINQALEQADDEINSFLGRRYQLPLPTVPGMLNKIAIIIAFYWLADRD QQATNLLEERYKMQLETLREIASGKRELGLPTIEAPAESSVGKVELIQTNERLFTRNSLRDVL
Specific function: Unknown
COG id: COG4387
COG function: function code S; Mu-like prophage protein gp36
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To phage Mu protein gp36 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009752 [H]
Pfam domain/function: PF07030 DUF1320 [H]
EC number: NA
Molecular weight: Translated: 16633; Mature: 16502
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIYATKQDLIDRDEQMLWNFAINRETGELNDTYINQALEQADDEINSFLGRRYQLPLPT CCEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCC VPGMLNKIAIIIAFYWLADRDQQATNLLEERYKMQLETLREIASGKRELGLPTIEAPAES CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCC SVGKVELIQTNERLFTRNSLRDVL CCCEEEEEECCCHHHHHHHHHHCC >Mature Secondary Structure AIYATKQDLIDRDEQMLWNFAINRETGELNDTYINQALEQADDEINSFLGRRYQLPLPT CEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCC VPGMLNKIAIIIAFYWLADRDQQATNLLEERYKMQLETLREIASGKRELGLPTIEAPAES CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCC SVGKVELIQTNERLFTRNSLRDVL CCCEEEEEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]